Gene Shel_07660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07660 
Symbol 
ID8394657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp889222 
End bp889935 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID644985526 
ProductABC-type multidrug transport system, ATPase component 
Protein accessionYP_003143171 
Protein GI257063499 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.771669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.239168 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGG CTGTATCCGT ACAGAACCTG TCGAAGGTGT TCGGCACGCG CAAGGCGCTC 
GACGGTGTGT CCTTCGAGCT GCCCGAAGGT GCATTCCTTT CCATCTTCGG CCCTAACGGC
GCGGGAAAGA CCACGCTTCT GCGTGTGCTG TCCACGCTGT CTCGGGCAAC CGGCGGCAAG
GCCGAGGTTC TTGGCATCGA CATCAAGGAG GAGCCTGACA GGGCACGCAG CGCCATCGGG
CTCATCTCCC ACGAGTCCAT GCTGTATCCC GACCTGACCG CCTACGAGAA CCTCATGTTC
ATCGCCAGAC TGTACGGCAT CGAGGATCCC GACACCCGTG TGCGCGAGAT GCTTCGCGCC
GTAGAGCTGG ACCATCGCCG CTTCGACCAG GTCCGCACCT TCTCCCGCGG CATGACCCAG
CGCCTGTCCA TCGCCCGCGC TCTGCTCAAC GACCCGCAGG TCGTGTTTCT GGATGAACCC
TATGCGGGCC TCGACCCCCA TGCGGTGGAC ATCTTCGACA CGCTCATCGG GCAGCTGCGC
GAGGGGCGCA CCTTCGTCAT GGTGTCGCAT GACTTGCAGA AGGGCTTCGA CTCCTGCACC
CACGCGCTCA TGCTGGCGCG GGGCAGGGTG GTGTCGTACT CACCCAAGCA GGACATCGAG
TTCAGCGAGT TCAGGCAGCT GTATCTGGAA ACCGTCGGCA TGGGGGTGGC TTAA
 
Protein sequence
MTSAVSVQNL SKVFGTRKAL DGVSFELPEG AFLSIFGPNG AGKTTLLRVL STLSRATGGK 
AEVLGIDIKE EPDRARSAIG LISHESMLYP DLTAYENLMF IARLYGIEDP DTRVREMLRA
VELDHRRFDQ VRTFSRGMTQ RLSIARALLN DPQVVFLDEP YAGLDPHAVD IFDTLIGQLR
EGRTFVMVSH DLQKGFDSCT HALMLARGRV VSYSPKQDIE FSEFRQLYLE TVGMGVA