Gene Shel_07630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07630 
Symbol 
ID8394654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp885514 
End bp886203 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content59% 
IMG OID644985523 
Producthypothetical protein 
Protein accessionYP_003143168 
Protein GI257063496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.48578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAG AGAAAGTCGA CCAGACTGAG AAGGCCGCGA AGAAGGGCAA GAAAAAGTGG 
CCCATCGTCG TAGGTGTCTT GGCTGTTGTT ATTGCGGCTG CTGGTGCAGG CTTCTGGGTC
TGGCATGGAA CACCGGGTTT CTGCAGTGCA ATTTGTCACA CTCCTATGGA TGCGTATGTC
GAAACGTACG TCGATGGCAC CCATGACAAG TATGGCAACG AGCTCACCGA CGAAAGCGCT
CAGAACGCAA TGATGGCTCG CATGCATGGC CAGATGGGCA CCGCTGACTG CCTGGCTTGC
CATGTTCCTA CGCTGTCTGA GCAGATCACC GAAGGTATGC ATTGGGTTAC TGGCAATTAC
GAGGTGCTGG GTACCACGTC CATGGGCAAC ACCATTCTGG ACAGCAAGAC GCTCACGCAG
CTGACCGCTG CCCGTGGCGG CACCGCCGAC GAGTTCTGCC TGAACGAGTC CTGCCACAAC
ATGACTCGCG ACGACCTGAT CACCGCCACC GCCGACCTGA GCGACGTCCG CAACCCGCAC
GTCCCGCAGC ACGGCGAGAA CGACTGCGGC GTGTGCCACA AGGGCCATGC CCAGAGCGTG
AACTACTGCA GCACGTGCCA CAACGACGCT CCCATCCCCG AGGGTTGGCT GACCGCCGCT
GAGGCCGCTC AGATTCAGGT CATCAAGTAA
 
Protein sequence
MAEEKVDQTE KAAKKGKKKW PIVVGVLAVV IAAAGAGFWV WHGTPGFCSA ICHTPMDAYV 
ETYVDGTHDK YGNELTDESA QNAMMARMHG QMGTADCLAC HVPTLSEQIT EGMHWVTGNY
EVLGTTSMGN TILDSKTLTQ LTAARGGTAD EFCLNESCHN MTRDDLITAT ADLSDVRNPH
VPQHGENDCG VCHKGHAQSV NYCSTCHNDA PIPEGWLTAA EAAQIQVIK