Gene Shel_07620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07620 
Symbol 
ID8394653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp884291 
End bp885169 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content60% 
IMG OID644985522 
Product4Fe-4S protein 
Protein accessionYP_003143167 
Protein GI257063495 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02163] ferredoxin-type protein, NapH/MauN family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.49628 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCATGG CAAAAGGAAA GGCCAAAGTC GGCGGTTTGA CGGTGGCGCG ACATGTGGTT 
CAGGTCGTTA TGGCCTGCCT GTTCTGCGTG CCTCTGTTCG CCGCGGGATG GACCGTTCTG
GGCCGGTATG CCGGTGGCGA CGACGCTGTG GCCACGCCCT CCGAGCTGCC TGTCTGGGGC
AGCCTGTCCT CGTCCCAGAT TCTCGGCATC GACCTGCTCG ACCCGTTCGC GGCCTTGCAG
GTGATTGTCG CTTCGAAGTC CGTCGCCTCC GCCATGCTGT GGGTGTTGCC CATACTTATT
TTGTATGTGC TCATCCGTGG ACGCGTGTTC TGCGGCTGGG TGTGTCCTGT GAACCTTTTC
TTAGAGGTTG TCGATTGGAT CCGCGGCCGC TTGGGCATCA AGGTTTCCGA AATGCCTGTG
CCTCGCTGGG TCAAACCCGT CGTCGCAGCA GCCGTTCTGG TTCTGTCTGC CATCGTGTCG
GTTCCGATCT TCGAGATGGT CAGTCCGGTG GGTGCTCTCA ACCGCGCGAT TCTGTTCGGT
TCCACCCTGG GCCTTTGGAC GTTGGTCGCC ATTGTCATCG TGGAACTCTT CTGGGGCCAC
CGCGTATGGT GCCGTTCGCT GTGTCCGTTG GGCGGCTTCT ACCAGACCAT CGGCGCGGTG
GGGCTTCTGA GCGTGAAGAT CGACCATGAC GCGTGCATCA GCTGTAACCT TTGCAAGAAA
GCATGCCTTT GCGATCCGTC CATTTTGGAC GCCGCGGTGG CAGGGGAGGC CGATCGGGTA
GCATCCGGCG ACTGCATGTT GTGTGGAAAA TGTGTAGACC ACTGTCCGAA GGATGCTTTG
AAGATTGGAG TGGCGGTGCC CAAGGACCTG TCCCTGTAG
 
Protein sequence
MFMAKGKAKV GGLTVARHVV QVVMACLFCV PLFAAGWTVL GRYAGGDDAV ATPSELPVWG 
SLSSSQILGI DLLDPFAALQ VIVASKSVAS AMLWVLPILI LYVLIRGRVF CGWVCPVNLF
LEVVDWIRGR LGIKVSEMPV PRWVKPVVAA AVLVLSAIVS VPIFEMVSPV GALNRAILFG
STLGLWTLVA IVIVELFWGH RVWCRSLCPL GGFYQTIGAV GLLSVKIDHD ACISCNLCKK
ACLCDPSILD AAVAGEADRV ASGDCMLCGK CVDHCPKDAL KIGVAVPKDL SL