| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07590 |
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| Symbol | |
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| ID | 8394650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 881022 |
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| End bp | 883577 |
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| Gene Length | 2556 bp |
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| Protein Length | 851 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985519 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003143164 |
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| Protein GI | 257063492 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.676481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTT CTAGGCGAGC GTTTGTGAAA TCGTCCGCCG TCGCAGCGGC TATGATGGCT
GCTGGCGGTA GCTTGGCTGC CATGGCCGGC TGCAGCAACG GTGGCTCGAC GGACGCAGGC
GGCGATTCTG CCGCAACCGG AAACATCGAG GTCAAATCGG CCGTTTGCCG TTACTGCGGC
TGCGGTTGCG GCGTTCTGGT CAGCGTGGCC GACGGCAAGG TCATCCAGGT CGCGGGCGAC
CCCGATTGCC AGTCCAACCT TGGCCTGAAC TGCATCAAGG GCTACTATCT GGGCAGCCTG
CTGTATGGTG AGAACCGCCT TACCAAGCCC ATGATCCGCG ACGACGCGGG CACCAAAGGA
ACGGGCGAAG GCCTCCGCGA GGCCGAGTGG GACGAGGTTC TTGACCTGGT AGCCTCCAAG
CTGAAGGAGA CCTGGAAGAA CGATAAGAGC CGTCTGGCGT TCTGGGGTTC CGGCCAGCAG
CCCATCACCG AGGGCTATCT GCAATCTAAG TTCTGGAAGG CCGGTCTGCT GTCTAACAAC
ATCGACCCCA ATGCACGCAT GTGCATGGCT TCCGCCGTCG TGGGCTTCAT GAACGTTTTC
GGTACCGACG AGCCCGCCGG CTGCTACAGC GACATCGACA ACGCCGACGT GTTCATCACC
TGGGGCGCCA ACATGGCCGA AGCGCATCCC ATGCTGTTCA GCCGCGTGTC CGCTCGTAAG
CTGGCCGACG AGAACGTCAA ACACATCGAC ATCACCACGC TGAAGACCCG TACGTCCACC
GATGCCGAGC ACGTCCTGCT GTTCCGCCCC GGCACGGATC TGGCCATCAC CAACTGCATC
ATGAACTACC TGATTAAGAA CGACACGTAC GACAAGCAGT TTGTCGCCGA TCACCTGCAG
TTCAAGATGG GCACCGAAAA CATCGGCTAC CCCTACGAGG ACGGTTACGA CAAGTCCGAC
ATCGGCTCCA AGGTTGACGA AACCACGCCC TGCACGTTCG AAGAGTTCGC AGCCCGCCTG
GAGGACTACA CCCTGGAATA CACCAGCAAC CTGTCCGGCG TGTCCCAAGA AGACCTGCAG
ATGCTGATCG ACGTGTTCTC CGATCCCGAG CTGCGCGTCA TGTCCCTGTG GACGATGGGC
GTGAACCAGC ATCATCGCGG CACGTGGATG AACCACAACC TGCACAACCT GCACCTCATC
TCCGGCAAGT ACGGCAAGCC CGGCTGCACC GCGTTCTCCC TGACCGGCCA GCCTTCCGCC
TGCGGTACCG CCCGCGAGGT AGGCACCTTC TGCCACCGCC TGCCCGCCGA CCTGGTGGTC
AAGAACCCGG TCCATCGCCG CTATACCGAG GCCGTCTGGG ATTTGCCCGA AGGCTACCTG
GATGCCATCG AGACCCCAGG CTTCCACACC ATCAAGATGT TCCGCGAGAT GTCCAAGGGC
AACATCGACT TCCTGTGGTC CGCCCATAAC AACTGGGCAC AGTCTCTGCC GAACCTGACC
CGTTTCCTGG GCATGGACGG CGAGCACGAG GGCATCTTCG ACACGTTCAT CGTCGTGAAC
GAGGTATACC CGACCATAAC CTGCGACTAC GCCGACGTGG TTCTGCCTGC GGCCCTCTGG
GTCGAGCGCG AAGGCCAGTT CGGCAATGCC GAGCGCCGCA CCAGCGTCTT CCAGAAGTGC
GTCGAGCCCA TGGGCGAGGC CAAATGGGAC GTCTGGATCA TGATGCAGAT CGCCCAGCGC
GTGCTTGAGG GTGAGAAGAT CGGCGATGCC GACGCCTTCG ACCACCTGTT CGGATTCATC
TGGGACAAGG AGGCCGGCGA CTTCATCGGC GACGATCGCG AGACCAACCG CGCCATCTGG
GAGGAGTACC GCATCTTCTC CAACCCGGAG ATGAAGGACA CCGTTGCAGC CATCAACACC
GAAAACAACA TGCACATGGA AGCCAAGCAG CTGGCGCCGT ATGACGAATA CATCGAGCAG
CACGGCCTGA CCTGGCCCGT CCGCGAAGTC GACGGCAAGT GGCTTCCCAC CAAGTGGCGC
TTCACCTACG GCGACCAGGC AGAGGGCTAC GACCAGATCG GCATCGAAAT GTACGGTCAG
CAGGGCCTGG CCAACGACAT GTCGTTCTAC AAGACTCCCG ACCAGAAGCC TTCCGTGGTG
TTCCGTCCGT ACGAGCCGCC CGCAGAAGAG CCCGACGCCG ACTTCCCGTT CTGGTTCTGC
ACCGGCCGTC TGCTGGAGCA CTGGCACACC GGCTCTATGA CCCGCAACGT CGCCGAGCTC
GACCGCGCGC TGCCCGAGGC TCTGCTCAAC ATGAATCCCG CCGATATGGA GAAGCTGGGC
CTGAAGGACC GCGACAGGGT CCGCGTCACG TCCCGTCACG GCTCTTTCGA AATCACCGTT
TCCAACGCGG GTCGCACCGA ACCGCCCGAA GGCCTCGTCT TCGCGCCGTT CTTTGCCCGC
GAGACGCTGA TCAACCTGGC GGTGCATGAT TACTATTGCC CGCTGTCGAA GGAAACCGAC
TACAAGAAGA CCTGCGTCCA GATTGAGAAA GCATAA
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| Protein sequence | MDLSRRAFVK SSAVAAAMMA AGGSLAAMAG CSNGGSTDAG GDSAATGNIE VKSAVCRYCG
CGCGVLVSVA DGKVIQVAGD PDCQSNLGLN CIKGYYLGSL LYGENRLTKP MIRDDAGTKG
TGEGLREAEW DEVLDLVASK LKETWKNDKS RLAFWGSGQQ PITEGYLQSK FWKAGLLSNN
IDPNARMCMA SAVVGFMNVF GTDEPAGCYS DIDNADVFIT WGANMAEAHP MLFSRVSARK
LADENVKHID ITTLKTRTST DAEHVLLFRP GTDLAITNCI MNYLIKNDTY DKQFVADHLQ
FKMGTENIGY PYEDGYDKSD IGSKVDETTP CTFEEFAARL EDYTLEYTSN LSGVSQEDLQ
MLIDVFSDPE LRVMSLWTMG VNQHHRGTWM NHNLHNLHLI SGKYGKPGCT AFSLTGQPSA
CGTAREVGTF CHRLPADLVV KNPVHRRYTE AVWDLPEGYL DAIETPGFHT IKMFREMSKG
NIDFLWSAHN NWAQSLPNLT RFLGMDGEHE GIFDTFIVVN EVYPTITCDY ADVVLPAALW
VEREGQFGNA ERRTSVFQKC VEPMGEAKWD VWIMMQIAQR VLEGEKIGDA DAFDHLFGFI
WDKEAGDFIG DDRETNRAIW EEYRIFSNPE MKDTVAAINT ENNMHMEAKQ LAPYDEYIEQ
HGLTWPVREV DGKWLPTKWR FTYGDQAEGY DQIGIEMYGQ QGLANDMSFY KTPDQKPSVV
FRPYEPPAEE PDADFPFWFC TGRLLEHWHT GSMTRNVAEL DRALPEALLN MNPADMEKLG
LKDRDRVRVT SRHGSFEITV SNAGRTEPPE GLVFAPFFAR ETLINLAVHD YYCPLSKETD
YKKTCVQIEK A
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