| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07570 |
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| Symbol | |
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| ID | 8394648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 878668 |
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| End bp | 880143 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985517 |
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| Product | transcriptional regulator with HTH domain and aminotransferase domain |
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| Protein accession | YP_003143162 |
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| Protein GI | 257063490 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.716498 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.392489 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATA TCGACAGATC GAGCACCACA AATTTATACA CACAGATATA TGAAGGCATC
AGGCAGGATA TCGAATCAGG CGACCTTGTT GCCGGAGAGA AGCTGACACC CATCCGGCGT
CTGGCCCACG AGCTGCATGT GTCCCGCAAT ACGGTTGAGA TGGCGTACCA GCAGCTGCTG
ACCGAAGGTT TCGTCAAAAG CCGGACGGGA TCGGGCTACG TCGTCAACGA CGTCGAGTTC
ATGCGGGTGA AGTTCGGTGA GGCCTTTCCT GCCGCATCCT CCGTCGTGCC GAAAGGGACC
AGCATCGAAG CGGTCTTCGC CGAAGACCCG TACAATACCA AATCGGATAC GCCATATGAC
TTCACCTATG GAGACCGCAG CCCCAAGTCA TTTCCCTCGC GCACCTGGCG CCTGCTTACC
GACGAGGTGC TGGAAACCGT CGGCGGCCGC ACGGCGCAGT ACGGCAACGC TTGGGGCGAG
CCCGGGCTTC GCATCGAGAT AGCGCGTTGG CTGCGTCGCA CGCGTTCCGT CGACTGCACG
GCCGACCAGA TTGTCATTCT GCCAGGCACC CAGCCGGCCG TGGACAGCAT ATTGACCCTG
TTCAACTCTC AGTTCGACAT CGTAGGGATG GAAGATCCTG GCTATCGGGG CGTACGGGAC
GTGTTTCGCA ACCGCGGATT CACGGTTGTG CCGCTGCCCG CCGCCATCGG AGGCGAGATG
GAGCCGAACG TCCATTTCAC AGACGCCTTG CAGGCCAGCA ACGCGAAGCT CGTGTTCCTG
ACGCCGTCGG TGCAGTTCCC CACTGGATCG CTCATGCCCA TTCTCACGCG CATACGCACG
CTTCGCTGGG CCATGGACAA CGACGCGTTC ATCATCGAGG ACGACTATTG CCGCGAGTTC
CTGTATTCGG ACCGGCCGCT GCAGACGCTG CAGTCCATGG ACACCGACGG CCGCGTGATT
TACCTGGGCA CTATGTCCAA GATGCTCTCC CCCGCACTGC GCGTCAGTTA CATGGTTCTG
CCGCAGCGCC TGATGTCGCG CTGGAAGCGC GCCCACGAGC AGTACTATTG CCCGGTGCCC
TGGCTAACCC AGGAGGTCCT GCGGCTGTAC ATGGCCCGCG GTTACTGGAC CCGCAACACG
CGGCGCGTCA CAGCGGAGTA CGAGGCCATC CATGCCCTGG TCATGGAATC TCTCGATCGG
GAAATGGGCG ACCGCATCGA CATCCTCGGC GGCACGGCCG GGCTGTATCT GCTCGTGCGC
ACGAAAGACG GCAGGACGCA GGAGGAGCTG ATCCGGCTGG CCGCGCAGCA GGATGTTCGG
GTGTATCCGA CCCGGCTGTA CTGCATGCAA TCCATGCACG GCATGGACGG CTACGTGCTT
CTAGGGTTTT CCGCCATCGA GAAGGAAAAC GTGGCCGAAG GCATCAGGCG GCTGCGGGTC
GCGTGGTTCG GAGAAGATTC TGGCCAGGCG ACATAG
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| Protein sequence | MKDIDRSSTT NLYTQIYEGI RQDIESGDLV AGEKLTPIRR LAHELHVSRN TVEMAYQQLL
TEGFVKSRTG SGYVVNDVEF MRVKFGEAFP AASSVVPKGT SIEAVFAEDP YNTKSDTPYD
FTYGDRSPKS FPSRTWRLLT DEVLETVGGR TAQYGNAWGE PGLRIEIARW LRRTRSVDCT
ADQIVILPGT QPAVDSILTL FNSQFDIVGM EDPGYRGVRD VFRNRGFTVV PLPAAIGGEM
EPNVHFTDAL QASNAKLVFL TPSVQFPTGS LMPILTRIRT LRWAMDNDAF IIEDDYCREF
LYSDRPLQTL QSMDTDGRVI YLGTMSKMLS PALRVSYMVL PQRLMSRWKR AHEQYYCPVP
WLTQEVLRLY MARGYWTRNT RRVTAEYEAI HALVMESLDR EMGDRIDILG GTAGLYLLVR
TKDGRTQEEL IRLAAQQDVR VYPTRLYCMQ SMHGMDGYVL LGFSAIEKEN VAEGIRRLRV
AWFGEDSGQA T
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