Gene Shel_07510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07510 
Symbol 
ID8394642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp872583 
End bp874070 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content60% 
IMG OID644985511 
ProductATPase component of various ABC-type transport systems with duplicated ATPase domain 
Protein accessionYP_003143157 
Protein GI257063485 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.568441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATAGCGG GGCCGTCCGG GTGCGGCAAA AGCACGTTGC TCCAGGTCAT CAACGGGTTG 
ATTCCCCATA TCAACGAGGG CGAGCTTACA GGTCGGGTGC TGTTCCGCGG CAAAGACGTC
ACCGATGTAG ATGCCCGCTA TCGCTGCGCG CATATCGGCT ATGTGATGCA GGATCCCGAA
GGCCAGTTCT GCACGTTCAC CGTGGAAGAG GAGCTTGCCT TCGGCATGGA GAACCTGGGC
ATCGACCCCG CCGAAATCGC GTACAGGAGT GAACGGGTGC TGGCCGAAAT GGGTATGGAA
GACCTGATGG ACCGAAGCCT GTCGGCGTTG TCCGGCGGGC AGAAGCAGAA GATCGCCATC
GCGTCGGTTC TGGCCATGGA GCCCGACGTG CTGCTGCTCG ACGAGCCTAC TGCGAACTTG
GACCCCGTCA GCAGGAACGA TGTTCTTGAG CTGGTGGTTT CCTCCGCGCG CCGCTCAGGC
ATGACGGTCA TCATGGTCGA GCACAACCTT TCCGACATAA TCGACGCCAT CGACACGTTT
ACCGTCATGG ACGCACAGGG GAACGTCGTC GTTCAGGGCA GCCGTAGCGA TGTGATCGGC
CGGTTGGAGG ACCCGGATTG TTCGGAGCTT CGAGGCTACC TTCCTGGTTC GTTGTGGGGG
CCTCAGGCCA TCGAGTCGGT CTGGCAGGAC GACGACCTCA CCGTACGCGG AGAACCCGTC
CTTCGTGTGA GCGACGTCTC TTTCGCGTAC CCCTTGAACA AGGGATTTCG CAAACGCACG
TATGGCCCGC CTGTGCTTGA TGGTGTCGAC TTGACGGTAT ATCAAGAGGA CTTTCTCGCT
GTGGTCGGCC AGAACGGCAC AGGGAAATCG ACCTTGTTCA ACGTCATATT CGGGCTCTAC
GAGCAGCAAT CGGGCAGTGT GGAACTCTTC GGGCAGGACA CGCGAACCAT GCGCAAGAAG
GACATGTACC GCACCATGGG GCTCGTGTTC CAGAATCCTG AGCTGCAGTT CATCACGAAC
CAGGTTGACG ACGAGCTCAT GGCCAGCCTC AAGGACGAAC CCATGTCTGA CGGCGAGAAG
CACGACCGGG TGAGCGCGAT GCTGGAGCGC TACGGCCTTC TCCCGTATGC CGGGCAGAGC
CCCTTCGTGC TCAGCCAGGG GCAGAAACGC CGCTTGAGCG TGGCAACGAT GCTTCTGACC
AGCCAGAAGA TGCTCTTTCT CGACGAGCCC ACCTATGGGC AGGACACCCA GAACCGCATC
GAGCTTATGG ACGAGATGCT GCGCCTCAAT TCCCAAGGCG TGGCAATCGT CATGATCACG
CACGACCTCG AATTGATTCG CCGATACGCC AAACGCGTGG TGTGCCTGGA CTCGGGCAAG
GTGGTCCTCG ACGGCACACC CGCCGATTAC GATCGCATGT TGCGCGACGC CGAAACCGAC
CGAGCTTCTG ACCGGCGTAT GGAAGGAGGC CGGGTCGACC ATGTTTAG
 
Protein sequence
MIAGPSGCGK STLLQVINGL IPHINEGELT GRVLFRGKDV TDVDARYRCA HIGYVMQDPE 
GQFCTFTVEE ELAFGMENLG IDPAEIAYRS ERVLAEMGME DLMDRSLSAL SGGQKQKIAI
ASVLAMEPDV LLLDEPTANL DPVSRNDVLE LVVSSARRSG MTVIMVEHNL SDIIDAIDTF
TVMDAQGNVV VQGSRSDVIG RLEDPDCSEL RGYLPGSLWG PQAIESVWQD DDLTVRGEPV
LRVSDVSFAY PLNKGFRKRT YGPPVLDGVD LTVYQEDFLA VVGQNGTGKS TLFNVIFGLY
EQQSGSVELF GQDTRTMRKK DMYRTMGLVF QNPELQFITN QVDDELMASL KDEPMSDGEK
HDRVSAMLER YGLLPYAGQS PFVLSQGQKR RLSVATMLLT SQKMLFLDEP TYGQDTQNRI
ELMDEMLRLN SQGVAIVMIT HDLELIRRYA KRVVCLDSGK VVLDGTPADY DRMLRDAETD
RASDRRMEGG RVDHV