Gene Shel_07490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07490 
Symbol 
ID8394640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp871031 
End bp871369 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content53% 
IMG OID644985509 
Producthypothetical protein 
Protein accessionYP_003143155 
Protein GI257063483 
COG category[S] Function unknown 
COG ID[COG4466] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.635673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.494829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTG AGAAGCAGGT TCATATTGTA GATGATATTC GTTCGGAACT CACCTCTCGC 
ACCAATACGC GTCTGAAGGT TCGCGCGAAT ATGGGTCGTT CCAAGATTAT CGAGTGTGAA
GGCACCTTGA TGCAGACCCA CCCTGCGTTG TTCATCCTTG AAGTCGACCG TAAGCGTGGC
CGCACTGCCC GTCAGTCCTA TCAGTACGTC GATGTGCTGA CTGGCATGGT CGAGCTGTAC
GACCCGAAGT CCGGAGAGCC TCTGTTCATC CTCGAGACCG AGGAGAAGGA AGACGGCATT
TTCGGAGTCG GCCTCGATGG AGAGGATGAC GAGGAATAA
 
Protein sequence
MELEKQVHIV DDIRSELTSR TNTRLKVRAN MGRSKIIECE GTLMQTHPAL FILEVDRKRG 
RTARQSYQYV DVLTGMVELY DPKSGEPLFI LETEEKEDGI FGVGLDGEDD EE