Gene Shel_07410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07410 
Symbol 
ID8394632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp863042 
End bp864250 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content62% 
IMG OID644985501 
ProductFe-dependent oxidoreductase, alcohol dehydrogenase 
Protein accessionYP_003143147 
Protein GI257063475 
COG category[C] Energy production and conversion 
COG ID[COG1979] Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT TCATCTTCTG CTCCCCGACG CAATTCGTCT TCGGACATGG CGCCAACGAC 
AAGATCGGCG AGATGCTCGC TCAGCGCGAA GGCTTCAAGC GTGCGCTTCT GGTCTACGGC
CAGGGCTCCG TCGTGCGCAC GGGCACGCTG GACCGCGTCA AGAAGTCTCT GGACGCAGCC
GGCATCGAGT ATGTCGAGTT CGGCGGCGTG CGTCCGAACC CCGAGGTCAA CGACGTGCGC
AAGGGTATCG AGGCCGTGCG TGAGAACGAC ATCGACTTCA TCCTGCCTGT TGGCGGCGGC
AGCACCATCG ACTGCGCCAA GGCTATCGGC TTCGGCGCGC TGCACAACGG CGACGTGTGG
GACTTCTTCA GCGGCAAGGC CGCAGTCGAG CGCTGCATGC CCATCGTCGC GGTGCTGACC
ATCCCTGCCG CGGGTTCCGA GGCCTCCAGC TCCTGCGTCA TCAGCAACGA CGAACTTGGC
CTGAAGAAGG GCACCAACGG CGACGCCTTC CGTCCCGTCA TGGCTTTCAT GGATCCTGAG
GTTACCTTCA CGCTGCCTGC GTACCAGACG GCGGCCGGCG TGACCGATAT GATCGCCCAT
ATCTGCGAGC GCTTCTTCAG CGGCGTAGGC GATGTGCCCG TCACCGATAA CATGGCATGC
GACGTCATTC GCGCCCTTAT GGATGCGGCG CCCCAGGTTC TGGAGAACCC CGAGGACTAC
GACGCCCGCG CAGCCATCAT GTGGGCTTCC ACCTTGGCTC ACAACGACGT GCTTGGCCTG
GGCCGTTCCA CCAATCCTGC GTCCCGCGCC GGCGGTTGGG AAAGCCACGC GCTCGAGCAC
GAGCTTTCCG CCTTCGACCC CAAAATCACC CACGGCGCCG CCCTTGCGGT CATCATGCCC
GCCTGGATGC GCTACGTGTG GCGTGAAGAT CCGAGCCGCT TCTTGCTGTT CGGCATGAAT
GTCTTCGGCA TCGAGCCCAT CGACGACACG GATGAGGCCG TCGAAGATGC GGTTACGGTC
ATCATCGACG AGCTGCAGGG ATTCTTCGCC AGCATGGGCA TGCCCACCAA GTTGGGCGAT
TTCGGCCTGA AGCCCGAAAA CATCGATGCG TTCCTGAAGA CTCTGGAGGC CAACAAGGGC
TCCGTGTTCG GCGGCTTCAA GAAGCTCACC ATGGACGATG CCCGCGCCAT CTATGAAAGC
GCGTTTTAA
 
Protein sequence
MNDFIFCSPT QFVFGHGAND KIGEMLAQRE GFKRALLVYG QGSVVRTGTL DRVKKSLDAA 
GIEYVEFGGV RPNPEVNDVR KGIEAVREND IDFILPVGGG STIDCAKAIG FGALHNGDVW
DFFSGKAAVE RCMPIVAVLT IPAAGSEASS SCVISNDELG LKKGTNGDAF RPVMAFMDPE
VTFTLPAYQT AAGVTDMIAH ICERFFSGVG DVPVTDNMAC DVIRALMDAA PQVLENPEDY
DARAAIMWAS TLAHNDVLGL GRSTNPASRA GGWESHALEH ELSAFDPKIT HGAALAVIMP
AWMRYVWRED PSRFLLFGMN VFGIEPIDDT DEAVEDAVTV IIDELQGFFA SMGMPTKLGD
FGLKPENIDA FLKTLEANKG SVFGGFKKLT MDDARAIYES AF