Gene Shel_07390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07390 
Symbol 
ID8394630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp861856 
End bp862698 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID644985499 
Productconserved hypothetical protein TIGR00096 
Protein accessionYP_003143145 
Protein GI257063473 
COG category[R] General function prediction only 
COG ID[COG0313] Predicted methyltransferases 
TIGRFAM ID[TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACA TATGTGCCAC GCCCATCGGC AACTTAGGCG ACATCACGCT GCGGACGCTG 
GACGCGTTGC GTTCGGCCGA CGTCGTGTGC GCCGAGGACA CCCGCGTCAC GGGCAAGCTG
CTGGCCCATT TTGAAATAGA GAAGCGGCTG GAGCGGCTGG ACGAAGCCAC CATAACCGAG
CAGGCGGAAG CGGTTATCGA CCGCATCGCC GCAGGTCAAA CCGTGGCATT CTGCTCCGAC
GCCGGCATGC CGGGCGTGTC CGACCCAGGT GCCCGACTGA TTGCGGCGGC CCAGGCGAAG
GGTGTGCCCT ATACGGTTCT GCCAGGGGCA TCGGCTGCGA CGACCGCCTA TGTGGCCAGC
GGTTTTGTGA ACCCCAAGTT CTATTTCGCA GGGTTCTTCC CGCGCAAGGC GGGGCAGCGC
ACCGAAGCTT TGGAGGCGCT GCTGAACTTC GACGCCACCG TGGTGTTCTA CGAGAGCCCG
CACCGTCTGG TGTCGGCGCT TGCGGCCATT GCGGATACGC TGCCCACCCG CGAAGTGGCG
GTCTGCCGCG AGCTCACCAA GATCCACGAG GAAGTGGCCA GGGGCATGGC GGGCGAGGTG
GCCGCACGGT TCGCCGAACG CGAGGCCGCG TCGCCTATCA AGGGCGAAAT CGCCATCGTC
ATCGGTCCGC CGACGCAAGA CGAAGCGCAG GCGGCCCAAG TCACGACGGA GGATGCGGCG
CTTGCGCGGG CGCGTGAGCT GCTGGCATCA GGAGGCATGA CCAAAAAGGA TGTCATGCGC
GCGCTGTGCA AGGAGTTCAA TCTGAGCCGC AACGACGCAT ACGAACTGGT TCATCAGGCG
TAA
 
Protein sequence
MLYICATPIG NLGDITLRTL DALRSADVVC AEDTRVTGKL LAHFEIEKRL ERLDEATITE 
QAEAVIDRIA AGQTVAFCSD AGMPGVSDPG ARLIAAAQAK GVPYTVLPGA SAATTAYVAS
GFVNPKFYFA GFFPRKAGQR TEALEALLNF DATVVFYESP HRLVSALAAI ADTLPTREVA
VCRELTKIHE EVARGMAGEV AARFAEREAA SPIKGEIAIV IGPPTQDEAQ AAQVTTEDAA
LARARELLAS GGMTKKDVMR ALCKEFNLSR NDAYELVHQA