Gene Shel_07380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07380 
Symbol 
ID8394629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp860827 
End bp861747 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content65% 
IMG OID644985498 
Productesterase/lipase 
Protein accessionYP_003143144 
Protein GI257063472 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.627733 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTGC AATACAAGGC AGCCGAAACG CTGCTCAACC TGATAAACCG CGTTACCCGC 
GGCGGTCTGA AGGCCGTCAT GCTGAACCTG GTCAAAGACC CGCCCACCGT CAACGACGTG
CCCGAAAGCT TCTACAACAA GTACGATTGC CGGCGCCTTA TGGTGGAGGG TCGCCCCGTC
GTGCGCGTGC GCACGCAGAC GGGCGTCGAA CCGCAGGCGG CGCTGGTGTA CCTGGCGGGA
GGCGGCGGCA CCATGGGGCC GCTGCAAGTC CATTTCGACA TGGTGGAACA TGTGGCGAAG
CTCACGGGTT TCGATGTCTA CCTGGCCTTT TACCCGCTGG CGCCCGAACA CAACGCCCTG
GAGGCCCGCC GGTGGCTGGA CGTGGTGCAG GAGCGTTTGA CCGATGACTA CCCAGCGGAG
CGCATCTTCT TCGGCGGCGA CAGCTCAGGC GCCAACGTGG CCATAGCCCA CACGGCACAC
CAGGTTGCCA TCGGCTTCGG CGTGCCCGCA GGCGTCATAG CGATTTCGCC TGCCACGGGG
CTTGCCGACG GCGAAGACCG CGACATCCGG CTCAAGGCCG AAACCGACGA CCCCTACCTC
AGCGTGGCCA TGAACGACTA CATCGCCACG GTATGGGGGC GCGATATGGA CCTCTCCAGC
GGCGACTACT GCCCCAGCGG CGTGGATTTC GAAGGTTTTC CGCCCATGAT GCTCTTCTAC
GGAACCCACG AGCTGTTCTG CCCCCACGAC GACAAGCTGG TCGAACGCAT CCAAGCGGCA
GGCGTCGAAC TCGACGTGAC CCGCGGCGAA GGCCTGTGCC ACTGCTGGGC CGTACTGGGC
ATGCTGCCCG AGGCGAAACG CGCGCAACGC CGCATGGCCG AATGGATGGC CGCCCGCATC
GGCGTCGAAA AGGAGGCGTA A
 
Protein sequence
MSVQYKAAET LLNLINRVTR GGLKAVMLNL VKDPPTVNDV PESFYNKYDC RRLMVEGRPV 
VRVRTQTGVE PQAALVYLAG GGGTMGPLQV HFDMVEHVAK LTGFDVYLAF YPLAPEHNAL
EARRWLDVVQ ERLTDDYPAE RIFFGGDSSG ANVAIAHTAH QVAIGFGVPA GVIAISPATG
LADGEDRDIR LKAETDDPYL SVAMNDYIAT VWGRDMDLSS GDYCPSGVDF EGFPPMMLFY
GTHELFCPHD DKLVERIQAA GVELDVTRGE GLCHCWAVLG MLPEAKRAQR RMAEWMAARI
GVEKEA