Gene Shel_07360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07360 
Symbol 
ID8394627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp858600 
End bp860006 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content64% 
IMG OID644985496 
ProductFAD-dependent dehydrogenase 
Protein accessionYP_003143142 
Protein GI257063470 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.991458 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCA CGCGGCATGC CGATATCGCC ATCATCGGTG CGGGACCGGC CGGCATCTTC 
ACGGCTCTGG GGCTTTTGGG GCACAACTCA TCTGCCAGCA TTGTCATCGT GGAGAAGGGC
CTTCCCATCG AGCGTCGCCA CTGCCCGAAG CTAAAAGTGG GGCATTGCGT GGGCTGCGAG
CCCTGCCGCA TCACCACGGG CTTTTCAGGT GCGGGCGCTT TCTCCGACGG CAAGCTGTCT
TTGTCCCATG AGGTGGGCGG CGACCTGCCG CAGCTCATCG GTGCGGACCT GGCCCAGCAG
ACCATCGACC GGGTGGACAA GGTGTACCTG TCCTTCGGCG CCGACGAACA TGTGGAAGGC
CTCGGCAACG AGATCGAGGT CCGCGACATC CGGCGGCGCG CCATCCAGGC GGGCCTGCAG
CTGGTGGACT GCCCCATCCG GCATCTGGGC ACCGAGAAGG CGCAGGAAAT CTACGCGCTC
ATCGAGGACT ACCTGATCGA AAGCGGCGTG GAAATCCTTT TCGAGAGCGA ATGCGTCGAC
GTCATTGTGG AGAACGGAAC GTGCGTCGGG GTGGAGGTGC GTTTCGACGG CGAGGATGCG
ACCATCATGG CCGAGCGCGT GGTGGTGGCC ACGGGCCGTC GCGGCGCCGA CTGGTTGGAG
AAGCTGTGCA CGCGCCACGG CATAGGCCAC GCTCCGGGCC CTGTTGACGT GGGCGTGCGC
GTGGAACTTC GCAACGAGGT GATGGAGCGC GTGAACGACG TGCTCTACGA AAGCAAGCTC
ATCGGCTACC CGAACCCGTT TCGCAACAAG GTCCGCACGT TCTGCCAGAA CCCCGGCGGG
TTCGTCAGTC AGGAGAACTA CGACGGCGGC CTGGCGGTGG TGAACGGGCA TTCCTACAAG
CAGCACAAAT CGCCCAACAC CAACCTGGCC ATCCTGTGCT CGCACAACTT CCGCGAGCCC
TTCAACCAGC CCATCGAGTA CGCCCAGAAG ATTGGCGAGC TGGTGAACAT GCTGGGCGCG
GGGCACATCC TGGTCCAGCG GTTCGGCGAC ATCCTGGACG GCAAGCGCAC CTGGCCCGAA
GAGCTGGCGC GCTCCAACGT GCGCCCCACG CTGCCCGACG CGGTGGCGGG CGACATCACC
AGCGCCCTGC CGTACCGCAC CATGACCTCG ATCATCGCGT TCATGCAGGC CGTCGACAAG
GCGATTCCCG GGTTCGCGTC CCACGAGACG CTGCTGTACG CCCCCGAGCT CAAGTTCTAC
AGCAACCGCG TGTCCATGGA CGAGAGGTTC ACCACCAACG TGGAGAACTT GTTCTGCCTG
GGCGATTCCA GCGGTTGGAC ACGCGGCCTC ATGATGGCCA GCGTCATGGG CTTCCTCATG
GGCGAGCGTT TGGCGACCGA AGAGTAG
 
Protein sequence
MGVTRHADIA IIGAGPAGIF TALGLLGHNS SASIVIVEKG LPIERRHCPK LKVGHCVGCE 
PCRITTGFSG AGAFSDGKLS LSHEVGGDLP QLIGADLAQQ TIDRVDKVYL SFGADEHVEG
LGNEIEVRDI RRRAIQAGLQ LVDCPIRHLG TEKAQEIYAL IEDYLIESGV EILFESECVD
VIVENGTCVG VEVRFDGEDA TIMAERVVVA TGRRGADWLE KLCTRHGIGH APGPVDVGVR
VELRNEVMER VNDVLYESKL IGYPNPFRNK VRTFCQNPGG FVSQENYDGG LAVVNGHSYK
QHKSPNTNLA ILCSHNFREP FNQPIEYAQK IGELVNMLGA GHILVQRFGD ILDGKRTWPE
ELARSNVRPT LPDAVAGDIT SALPYRTMTS IIAFMQAVDK AIPGFASHET LLYAPELKFY
SNRVSMDERF TTNVENLFCL GDSSGWTRGL MMASVMGFLM GERLATEE