Gene Shel_07320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07320 
Symbol 
ID8394623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp855872 
End bp856450 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content61% 
IMG OID644985493 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003143139 
Protein GI257063467 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.862775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTGG GATTCTATTT CAACATGAAA CGTTGCACGG GATGCCGTGC TTGCCAGGTG 
GCCTGTCAGG ATCGCAACGA CCTGGCTGTG GGGCTTGCCG CTCGCAAGGT GGAAAGCTAC
GTGGCCGGAA CCTACCCCAA CGCCATGCCG TACCACTTTT CGGCTGGATG CAACCACTGC
GAGAACCCGG CCTGCGTGGC GAACTGCCCC ACGGGCGCGT GCCAGAAGGC TGAAGATGGC
ACCGTGTTCC GCGATGAGGA AGTGTGCATC GGCTGCGGCA GCTGCGCGAA CTCCTGCCCA
TATGGCCATC CCATGATCGA CGACGAGGCC AAGAAGGCCA TCCGCTGCGA TTCCTGCCGC
ATCTTCCGCG AGAACGGACA GAACCCGGTA TGCGTGGACG CGTGTCAATA CCGTGCACTG
GACTTCGGCG ACCTGGATGA GCTGCGCGCG AAGTACACCG ACCAGGAGCT GGTAAACGAG
CTTCCCATCC TGCCGTCGGC CGCCGAGACC AGCCCGTCGC TTTTGGTGAA CCCGAAGGAT
GCCGCCTTGA ACGACGATTT CAAGATGTGG ATCATGTAG
 
Protein sequence
MTLGFYFNMK RCTGCRACQV ACQDRNDLAV GLAARKVESY VAGTYPNAMP YHFSAGCNHC 
ENPACVANCP TGACQKAEDG TVFRDEEVCI GCGSCANSCP YGHPMIDDEA KKAIRCDSCR
IFRENGQNPV CVDACQYRAL DFGDLDELRA KYTDQELVNE LPILPSAAET SPSLLVNPKD
AALNDDFKMW IM