Gene Shel_07290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07290 
Symbol 
ID8394620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp850685 
End bp852088 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content63% 
IMG OID644985490 
ProductFAD-dependent dehydrogenase 
Protein accessionYP_003143136 
Protein GI257063464 
COG category[R] General function prediction only 
COG ID[COG2509] Uncharacterized FAD-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA CCAACTACGA CATTCTTATC ATCAGCACCG GTCCAGCCGG CATTTTCACA 
GCGTTGAACC TGGTGCGCAG CGGGTCGAGC GCGCGCATCG CCATTGTCGA GAAAGGCCTG
CCCATCGAGC GGCGAAGCTG TCCCAAGGAA AAGGTCGGGC ACTGCATCGG CTGCAACCCG
TGCCGCATCA CCACGGGTTT TTCAGGCGCG GGCGCGTTTT CCGACGGCAA GTTGTCGCTG
TCCTACGAGA TGGGCGGCGA CCTTCCCCAG CTCATTGGCG AGAACCTGGC GCAGGACACC
ATCAACGCCG TCGACAGGAT CTACCTGGAA TTCGGCGCCG ACGAGCACGT GGAGGGCCTC
GAAGCCACTG AAGCCGTGAA AGAGATCCGC CGCCGCGCCA TCAAGGCGGG CCTGCAGTTG
GTGGACTGCC CCATCCGGCA CTTGGGCACC GAAAAGGCCC AAGAGATTTA CAGACGGATT
CAAACCTACC TGGCCGACGC CGGCGTCGAG CTGCTGTTCG AAAGCGAGTG CCGCGACCTG
GTCATCGAGG GCGGCGTGTG CCGAGGCGCA TTGGTGAGGG ACCGTGGTGG AGACGAAAAG
CGCATCCTGG CCGAGCGCAC CGTGGTGACC ACAGGACGCC GCGGCGCCGA CTGGCTGGAG
CGGCTGTGCA GCGAGCACGG CATCGAGCAT GTGCCTGGCC CCGTTGACGT GGGCGTTCGC
GTTGAGCTGC GCAACGAGGT GATGGAGCGC GTAAACAACG CCCTGTACGA GAGCAAGCTC
ATCGGATATC CCGACCCGTT CCGCAACAAG GTGCGCACGT TCTGCCAGAA CCCCGGCGGC
TTTGTGAGCC AGGAGAACTA CGACAACGGG CTGGCCGTGG TGAACGGGCA TTCGTACAAG
GAGCGCAAGT CGCCGAACAC CAACCTGGCC ATCCTGTGCT CGCACAACTT CCGCGAGCCG
TTCGACCAGC CCATCCAGTA CGCGCAGCGC ATCGGCGAGC TAGCGAACAT GCTGGGCGCG
GGACATATTC TGGTGCAGCG CTTCGGCGAC ATTCTGGACG GCAAGCGCAC CTGGCCCAAG
GAGCTTGTGC GCGCGAACGT GCGTCCCACC CTGCCCGACT GCGTGGCGGG CGACATCACA
AGCGCGCTGT CGTATCGCAC TATGACGTCG ATTATTGCGT TCATGCAGGC CGTTGACCAG
GCGATTCCTG GATTTGCGGC ACCTGAGACG CTGCTGTACG CGCCGGAACT GAAGCTCTAC
AGCAATCGGG TGAAGGTGTC GGAGAAGTTC GCTACCAGCA TGGAGGGATT GTACTGCTTG
GGAGATTCCA GCGGCTGGAC GCGAGGCCTC ATGATGGCCT CCGTCATGGG ATTCCTCATG
GGGGCTTACC TGGCTGAAAG TTGA
 
Protein sequence
MSNTNYDILI ISTGPAGIFT ALNLVRSGSS ARIAIVEKGL PIERRSCPKE KVGHCIGCNP 
CRITTGFSGA GAFSDGKLSL SYEMGGDLPQ LIGENLAQDT INAVDRIYLE FGADEHVEGL
EATEAVKEIR RRAIKAGLQL VDCPIRHLGT EKAQEIYRRI QTYLADAGVE LLFESECRDL
VIEGGVCRGA LVRDRGGDEK RILAERTVVT TGRRGADWLE RLCSEHGIEH VPGPVDVGVR
VELRNEVMER VNNALYESKL IGYPDPFRNK VRTFCQNPGG FVSQENYDNG LAVVNGHSYK
ERKSPNTNLA ILCSHNFREP FDQPIQYAQR IGELANMLGA GHILVQRFGD ILDGKRTWPK
ELVRANVRPT LPDCVAGDIT SALSYRTMTS IIAFMQAVDQ AIPGFAAPET LLYAPELKLY
SNRVKVSEKF ATSMEGLYCL GDSSGWTRGL MMASVMGFLM GAYLAES