Gene Shel_07240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07240 
Symbol 
ID8394615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp839682 
End bp844418 
Gene Length4737 bp 
Protein Length1578 aa 
Translation table11 
GC content63% 
IMG OID644985485 
ProductCoA-substrate-specific enzyme activase, putative 
Protein accessionYP_003143131 
Protein GI257063459 
COG category[S] Function unknown 
COG ID[COG3581] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG AAGCCCAGAA TACCGAAATC GCCCCGAACG GGCCTTTGCA TATCGGCATC 
GACGTCGGAT CGACCACCGT CAAGGTGTCG GTGCTCGACG ATGCCAACGA AATCCAATAC
TCCTGCTATC GCCGTCACCA TGCCGACGTG CGCGCCACCA TCATCGAGGT GCTGGAAGAG
GCCCAGCAGG CATTCCCGAC CACGCCCATG ACCATGGCCA TCACCGGTTC CGGCGGCCTG
CTGCTGGCCC AATGGCTCGA CATCGAATTC GTCCAGGAGG TCATCGCCTC CAAGACCGCG
GTTGAGACCT TTATCCCTCA GACCGACGTG GTCATCGAGC TGGGCGGCGA GGACGCCAAG
ATCATCTACT TCGACAACGG CATCGAGCAG CGCATGAACG GCACTTGCGC CGGCGGCACG
GGCGCGTTCA TCGACCAGAT GGCGGCCCTG CTGAACACCG ATGCCGGCGG CTTGAACGAG
CTGGCCAAGG GCTACACCAC CATTTATCCC ATCGCCAGCC GCTGCGGCGT GTTCGCCAAG
ACCGACGTGC AGCCGCTGCT CAACGAGGGT GCACATCGCG AAGACATCGC TGTGTCCATC
TTCCAGGCCG TGGTCACCCA GACCATCTCC GGCTTGGCCT GCGGACGTCC CATCCGCGGC
CACGTAGCGT TTCTGGGCGG ACCCCTGCAG TACCTCTCCG AGCTGGACCG TCGTTTCTGC
GAGACCCTCA ACTTGGATGA CGAGCACGCC ATCCGCCCCG AGAACGCTCA CCTGTTCGTG
GCGTCGGGCG CTTCTATCTG CGGCAAGAAG AACAAGCCGG AACTCATCGG CGACGTGCTG
GAACGCCTGC GCAACCTGGG TACTTTGCAG GGCTCCGAGG TCGTGCGCCT GCCCCCGCTG
TTCGCTACGG AGCAGGACTA CATCGATTTC AAGGAGCGCC ACGACAAGGA GAAGGTGAAG
CGCGGCGATC TGGCTGCCTA TCGCGGCACC GCGTATCTGG GCATCGACGC CGGCTCCACC
ACCTTCAAGA TGGCTTTGGT GGGCCAGGAC GGCGAACTGC TCTGGAGCCA TTACACCAAC
AACAAGGGCG ACGTGCTGGC AACCGCCAAG CGCGTCGTCG GCAAACTGTA CGCCGATTTG
CCCCACGACC CTGAAACCGG CGAGCCCCTG GTCACCATCG GCCACGCAAC CGTCACGGGT
TACGGCGAAG GCCTGCTGCT GGAAGCTCTC AACGTCGACT CCGGTGAAAT CGAAACCGTC
GCGCACCTGC GCGGCTCCCA GGAGATGCTG CCGGGCGTCG AGTTCATTCT GGATATCGGC
GGCCAGGACA TGAAGTGCCT GCGCGTGCGC AACGGCGTCA TCGAGCACAT CATGCTCAAC
GAGGCCTGCT CTTCGGGTTG CGGCAGCTTC ATCGAGAGCT TCGCCACGGG CCTGAACCTG
GACGTCCGCG AGTTTGCCCA GACCGCCAAT GCGGCCGAGA ACCCGGTCGA CTTGGGCAGC
CGCTGCACGG TGTTCATGAA CAGCCGCGTG AAGCAGGCCC AGAAGGAAGG CGCCACCGTG
GGCGACATCG CCGCGGGCCT GGCCATCTCC GTCATCAAGA ACGCCCTGTT CAAGGTCATC
AAAATCCGCG ACCCCAAGGA CGTGGGCGAC AAGGTCATCG TGCAGGGCGG CACATTCTTG
AACGACGCCG TGCTGCGCGC CTTCGAACAG CTTTCCGAAG TGGATGCGGT GCGTCCCGAC
ATCGCCGGCA ACATGGGCTC ATACGGCGCC GCGCTTCTGG CCCGCGACCG CGCAACGGGC
GAAAACCCCG TATCCTCGCT GCTTTCGCCT GAGGAGCTGG AGGCCCTGGC CCCGAAGCAC
CGCACCACGC GCTGCAAGGG CTGCTCCAAC AACTGCCTGC TCACCATCAA CGACTTCGGC
GTGGACCCGA ACACCGGCAA GCACCGTCGT TTCATTACGG GCAACCGCTG CGAAAAGGGC
GCCGGCCATC AGAACGATTC CAAGAACGTG CCGAACCTGT TCGAATACAA GAGCCACCGC
CTGTTCGATT ACGAACCGCT GGCGGAAGAA GACGCGCCCC GCGGCGTGGT GGGCATTCCG
CGCGCCCTCA ATATGTATGA GAACTACCCG TTCTGGTTCA CCTTCTTCAC CAAGCTGGGC
TACCGTGTGA TCCTGTCCGA CCCCTCCACG AAGGCCATCT ATAACAAGGG CATCGAGTCC
ATGCCGTCCG AGAGCGTGTG CTATCCGGCC AAGATGAGCC ACGGCCACAT CATGGACCTG
CTGGAGAAGC GCCCCGACTT CATCTGGATG CCCTGCGCCA AGTGGGAGCG TCTGGAGGAT
GAAGGCGCGG GCAACCATTA CAACTGCCCC ATCGTGGCCA GCTACTCCGA GGCGCTGCGC
CTGAACATCG ACGAGCTGAA GGATTCCGAA ACCAAGTTCC TGAACCCTTG GTTGCCCTAC
GACAAGAAGG ACCACCTGAA GAAGCGCCTG TACGTGGAGC TGTTCGAGAA CTTCAAGGAC
ACCACCACCA AGCACGCCAA GGCTCCGACG AAGGCCGAGG TCAACGCTGC GGTCGACGCC
GCATGGGCCG AGGACGAGGC CTTCAAGCGC GACATGCGCA AAAAGGGTGA AGCCACCTTG
GCGTGGATGG AGGCCACCGG CACCCACGGC ATCGTTCTGG CGGGCCGTCC GTACCACAAC
GACCCCGAGA TCAACCACGC CATCCCCGAG CTTTTGACCA GCTTCGGCCT GGCTGTGCTA
ACGGAAGACT CCGTGGCCCA TCTGGGCCAG GTGGAACGTC CCATCCGCGT CGTGGACCAG
TGGATGTACC ATACGCGCCT GTACGCTGCG GCGAAGCTTG CCACCCAGCG CAAGGACCTG
GACCTCATCC AGCTCAACAG CTTCGGCTGC GGTCTGGACG CCCTTACCAC CGACCAGGTG
CAGGAGATTC TGGAAGCGGC GGGCAAGGTG TACACCGTGC TCAAGATCGA CGAGGTGTCC
AACCTGGGCG CGGCCCGCAT CCGCGTGCGC AGCCTGCTTG CGGCGCTTAA GGACAAGCAG
GACGAGGAAG CCGTCCGCGA GATGGACGAG AGCAGTGCGG GCAAGACCTG CCCGGCCGAG
GAGCTGGACG TGAAAGCCCT GCTCACCAAC CCTGACGAGT TCATCGCCGA GAAGGCGGGC
ACCAAGGCTG GCGAGGTGGC CGAATACATC GTGAGCAACG TCCGGGCCAA CATCCCCGAG
AAACCCACGG AGAAGGCGAA GCCGGAGGTG CGCGAGCACT TCAAGAACCG CGAGAGCGCC
GATACGGAAT TCCCGCGCGT CGAATTCACC AAGGAGATGA AGGAATCCGG CTACACAATC
TTGGCCCCGC AGATGGCCCC GTACCACTTC GAGCTGCTCA AACCTGTGTT TTTGGCCAAC
GGCTACAACA TGGTGCTGCT GCCGTCGGTG GACCATGGCG CAGTGGATGC CGGCCTGAAA
TACGTCAACA ACGACATCTG CTACCCGTCC ATCCTGGTCA CGGGCCAGAT CATGGAAGCC
GTTACCAGCG GCGAGTACGA CACCGACCGT CTGGCCGTGC TCATCACGCA GACCGGCGGC
GGCTGCCGTG CCACCAACTA CATCGCGCTG ATCCGCAAGG CTCTCAAATC TGCAGGCTAC
GGCCATGTGC CGGTCATTTC GCTGGCGCTG CAGAACGGCC TTGACGAGAG CAACTCCGGT
TGGGAAGTGA CCGTGCCCAT GCTGAAGCAG GCCGTGTACG CTTTGAGCTA CGGCGACCTG
CTGATGATGG CCCTGTACCG CACGCGCCCC TACGAGGTGG AGCCGGGCAG TGCCCAGCGC
CTGTTCGACC ACTGGATGGA GGCCTGCAAG AAGGAGATCT ACGCCGGTAC GAACCGCAAA
CAGTTCGGGC GCACCTGCAA GGCCATTATC GACGACTTCG ACACGCTGCC GCTGACCGGC
GAGGGTACCA AGCCCCGCGT CGGCGTGGTG GGCGAAATTC TGGTCAAGTT CCATCCCACG
GCCAACAACC AGGTGGTGGA CGTCATCGAG CGCGAGGGCT GCGAGGCCGT CGTGCCCGGC
CTGATTGAGT TCTTCCTGTT CGGCATCGTA GGCCGCATCT TCCAGAAGGA CCCGTTGGGC
CGCTCGGCAA CAGGCGCCGT GGCCGCACGC GGTATCCTCA CACTGCTGGA TACCATGCGA
AAGCCCCTGA TCAAAGCCCT GGAGGAATCG AACCGTTTCG AGGCTCCGAC GGACATCTAC
ACCCTGGGCG CCTACGCCGA AGAGGTGCTT TCCACCTGCA ACTCCATGGG TGAAGGCTGG
CTGCTTACGG CCGAGATGAT CGAGCTCATC AAGACCGGCA CGCCGAACAT CGTGTGCGCG
CAGCCGTTCG CCTGCCTGCC GAACCACGTG GTGGGCAAGT CGGTCATCAA GGAGCTGCGC
CGCCGTCACC CGAAGAGCAA CATCGTGGCG GTGGACTACG ACCCCGGCGC TTCCGAGGTG
AACCAGCTCA ACCGCATCAA GCTGATGATT TCTGTGGCGA AGGCGAACCT GGAGGAGACC
GACGAGTTCA TTCGGGCATC CAACCTGGCG GCGGCTCAGC GGCGGCTGGA CGAGTCCGAC
ATGGTGAGCG CCAACGGTTG CGGCGCGCTG GACACCGATG CGTTGCTGGC GAAGATCGAC
GCCGCGCTGG CCGAGGATGA CGCGAAGGCC GCCGAAGGCG AACTGGTCGC GAAATAG
 
Protein sequence
MTEEAQNTEI APNGPLHIGI DVGSTTVKVS VLDDANEIQY SCYRRHHADV RATIIEVLEE 
AQQAFPTTPM TMAITGSGGL LLAQWLDIEF VQEVIASKTA VETFIPQTDV VIELGGEDAK
IIYFDNGIEQ RMNGTCAGGT GAFIDQMAAL LNTDAGGLNE LAKGYTTIYP IASRCGVFAK
TDVQPLLNEG AHREDIAVSI FQAVVTQTIS GLACGRPIRG HVAFLGGPLQ YLSELDRRFC
ETLNLDDEHA IRPENAHLFV ASGASICGKK NKPELIGDVL ERLRNLGTLQ GSEVVRLPPL
FATEQDYIDF KERHDKEKVK RGDLAAYRGT AYLGIDAGST TFKMALVGQD GELLWSHYTN
NKGDVLATAK RVVGKLYADL PHDPETGEPL VTIGHATVTG YGEGLLLEAL NVDSGEIETV
AHLRGSQEML PGVEFILDIG GQDMKCLRVR NGVIEHIMLN EACSSGCGSF IESFATGLNL
DVREFAQTAN AAENPVDLGS RCTVFMNSRV KQAQKEGATV GDIAAGLAIS VIKNALFKVI
KIRDPKDVGD KVIVQGGTFL NDAVLRAFEQ LSEVDAVRPD IAGNMGSYGA ALLARDRATG
ENPVSSLLSP EELEALAPKH RTTRCKGCSN NCLLTINDFG VDPNTGKHRR FITGNRCEKG
AGHQNDSKNV PNLFEYKSHR LFDYEPLAEE DAPRGVVGIP RALNMYENYP FWFTFFTKLG
YRVILSDPST KAIYNKGIES MPSESVCYPA KMSHGHIMDL LEKRPDFIWM PCAKWERLED
EGAGNHYNCP IVASYSEALR LNIDELKDSE TKFLNPWLPY DKKDHLKKRL YVELFENFKD
TTTKHAKAPT KAEVNAAVDA AWAEDEAFKR DMRKKGEATL AWMEATGTHG IVLAGRPYHN
DPEINHAIPE LLTSFGLAVL TEDSVAHLGQ VERPIRVVDQ WMYHTRLYAA AKLATQRKDL
DLIQLNSFGC GLDALTTDQV QEILEAAGKV YTVLKIDEVS NLGAARIRVR SLLAALKDKQ
DEEAVREMDE SSAGKTCPAE ELDVKALLTN PDEFIAEKAG TKAGEVAEYI VSNVRANIPE
KPTEKAKPEV REHFKNRESA DTEFPRVEFT KEMKESGYTI LAPQMAPYHF ELLKPVFLAN
GYNMVLLPSV DHGAVDAGLK YVNNDICYPS ILVTGQIMEA VTSGEYDTDR LAVLITQTGG
GCRATNYIAL IRKALKSAGY GHVPVISLAL QNGLDESNSG WEVTVPMLKQ AVYALSYGDL
LMMALYRTRP YEVEPGSAQR LFDHWMEACK KEIYAGTNRK QFGRTCKAII DDFDTLPLTG
EGTKPRVGVV GEILVKFHPT ANNQVVDVIE REGCEAVVPG LIEFFLFGIV GRIFQKDPLG
RSATGAVAAR GILTLLDTMR KPLIKALEES NRFEAPTDIY TLGAYAEEVL STCNSMGEGW
LLTAEMIELI KTGTPNIVCA QPFACLPNHV VGKSVIKELR RRHPKSNIVA VDYDPGASEV
NQLNRIKLMI SVAKANLEET DEFIRASNLA AAQRRLDESD MVSANGCGAL DTDALLAKID
AALAEDDAKA AEGELVAK