| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07230 |
|---|
| Symbol | |
|---|
| ID | 8394614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 839032 |
|---|
| End bp | 839649 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644985484 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003143130 |
|---|
| Protein GI | 257063458 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.350601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG ATGCCGTTTG CGTCGAAGAC CGACGCATCG TGAAAACGCG TGCCGCCTTG
CGCGAGGCGC TCATAGAGCT GACCGAGGAG CGGGGATGGA ACGGGTTTTC CATCAACGAC
CTGTGCGAAC GCGCAAACAT AAACCGCGGT ACGTTCTACA ACCACTACCG GGACAAAGAC
GAGTTGATGA TGGCGTTTCA GGACGAGGTG CTTGAACAGA TCGGAAACCT GCAGACGTCG
CTTGCGGACA TGTCGCTTGA AGAGGTGGCG ATGTGCGTCG GGTTCAAAAA GCCCCTGCCG
ATCATGGTCA CCCTGTTCGA TTATCTGCGT AAAGAGGGCC GGTTCCTGCA TGCGGTGCTC
GGTCCCAACG GCGACGCCGC ATTCGGGTTG CGACTGTGCA CCTATGTGTG CAACGATATC
GTGAAGGCCA TGCTGAACGA ACAGTACCGC ACGGGCGACG ATGCGTTCGT GGACTACTAC
GTCACGTTTT ACGCTTCGGC GTATTTCGGG GTCATCCGTC GCTGGATCGA GCAAGGTATG
GTCGAATCCT CCGAGGAGAT GGCCGTCATC TGCCAGCGCC TGCTGTTCAT CATGCCGGGC
GAGCCCATCA AACTCTAA
|
|---|
| Protein sequence | MAADAVCVED RRIVKTRAAL REALIELTEE RGWNGFSIND LCERANINRG TFYNHYRDKD
ELMMAFQDEV LEQIGNLQTS LADMSLEEVA MCVGFKKPLP IMVTLFDYLR KEGRFLHAVL
GPNGDAAFGL RLCTYVCNDI VKAMLNEQYR TGDDAFVDYY VTFYASAYFG VIRRWIEQGM
VESSEEMAVI CQRLLFIMPG EPIKL
|
|---|
| |