| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07160 |
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| Symbol | |
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| ID | 8394607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 829431 |
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| End bp | 830516 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644985477 |
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| Product | S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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| Protein accession | YP_003143123 |
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| Protein GI | 257063451 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) |
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| TIGRFAM ID | [TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.574869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCG ATGATTTCGA CTACGAACTG CCGCCTGAGC GCATCGCGCA GGAGCCTTGG
CCCGTGCGCG ACGAGTGCAG ACTTTTGGTG ATGGACCGCA AGACCGGCGA GGTGACCGAT
CGCATATTCC GCGACGTGGC GGAATACCTG CAGCCGGGCG ACGTGCTGGT TGCCAACGAG
ACCCGCGTGC TGCCGGCGCG CCTTTTGGGC TCGAAGCGGG GGACCGGCGG GGCCTGCGAA
GTCTTCCTGC TTCGTGAGCG CTTCGACGTG GAGCCGAAAA CCACCCACAC GGCCGTGTGG
GACGTGCTGG TGCGTCCCGG TCGCAGGTTG AAACCAGGTA CCGGCGCCAT GGTGGACTTC
GAAGGGCCCG ATGGGAACGT GGTGCTTTCG GCCGAAATCA TCGACTGGGG GTCGGACACG
GGCAAGGGCG AACGCATCGC GCGCCTGAGC ACGCCGTTGG ATTCCTTCGA CGAGGCCCTG
CACGCCGCGG GCCACACTCC GCTGCCGCCC TATATCAAAG GATACGCCGG CGACGAGGAG
ATGTACCAGA CGGTGTACTC CCAGGCGGAG ACCAGCGCCG CAGCGCCGAC CGCCGGACTG
CACTTCACGC CGGAGCTGAT TGGGAGCCTG AAGGCCAAGG GCGTCGAGTG GCACACCGTG
GAGCTGCAGG TGGGTCTGGA CACGTTCCGC GTGGTGGACG AGGACGACCC GGCGCAGCAC
GCCATGCACA CCGAGTTCTA CAGCGTGCCC CAAAGCGTTG TGGATGCCTG CGACGCAGCC
CATGCCCGCG GCAACCGCGT GTTCGCCGTG GGAACCACCA GCGTGCGGTC CCTGGAAAGC
GCGTTCGACC GCGAATCGGG AAAACTCCGA GCCCGCGACC ACGAAGCCAC CTGCCTGTTC
ATCCTGCCAG GCTACACCTT CGGCGTGGTG GACGGCCTGA TCACCAATTT CCACGTGCCC
CGCAGCACGC TCATGATGCT GGTCAGCGCG TTTTCGACGC GCGAGAACAT CATGGCCGCA
TACAAGCACG CCATAGACAG CGAATACCGC ATGCTGAGCT TCGGCGACGC CATGCTTATC
TGCTAG
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| Protein sequence | MRTDDFDYEL PPERIAQEPW PVRDECRLLV MDRKTGEVTD RIFRDVAEYL QPGDVLVANE
TRVLPARLLG SKRGTGGACE VFLLRERFDV EPKTTHTAVW DVLVRPGRRL KPGTGAMVDF
EGPDGNVVLS AEIIDWGSDT GKGERIARLS TPLDSFDEAL HAAGHTPLPP YIKGYAGDEE
MYQTVYSQAE TSAAAPTAGL HFTPELIGSL KAKGVEWHTV ELQVGLDTFR VVDEDDPAQH
AMHTEFYSVP QSVVDACDAA HARGNRVFAV GTTSVRSLES AFDRESGKLR ARDHEATCLF
ILPGYTFGVV DGLITNFHVP RSTLMMLVSA FSTRENIMAA YKHAIDSEYR MLSFGDAMLI
C
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