Gene Shel_07130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_07130 
Symbol 
ID8394604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp827152 
End bp827811 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content61% 
IMG OID644985474 
Productpredicted phosphatase 
Protein accessionYP_003143120 
Protein GI257063448 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.273384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTAT CCACGGTGGT TTTCGATTTC GACGGGACGC TGCATGACAG CATGCAGGTG 
TATCCGCGCG CCCTGAAGGC GGTTTGCCAG GGGCTTATGG ATCGCGGGCT CGTCGAGCGC
CGCGAGATGG GCGACGGGGA AATCGCCGGC TACATCGGCC TTACCACGAA GGAGATGTGG
CAGACCTTCG CCCCCGACCT GGACGAGGCT ACGCAGCGGC AGTCGGGAAT CGAGGTTGGC
CGCACTATGG ACGAGCTCAT CGCGAACGGG GAAAGCAAAC TGTACGACGG TGTGCCCGAC
ATGTTGCAGC GGGTGTTCGA TATGGGTCTT GACCTGGTGT TTTTGAGCAA CTGCCGCATT
GCGTACCAAG AAGTGTGCCG CAAGGCGTTC GGGATGGACG CATGGTTTTC GGCGTACTAC
AACTCCGAAG AAGCCCACGA CCTGCCCAAA GAGGTGATCT TCGAACGCAT TGCCGAGGTA
TTCGACGGCG ATTACCTTAT CGTGGGCGAC CGCGACAAGG ACCTGCAGAT TGCCCAGGTC
CACGGCCTGC CGTCCATCGG CTGCCTGTAC GGTTACGGCT CCCGCGAGGA GCTCGCCTGC
GCCACCTATC TTGTCGAGTC GCCGGGTGAT GTGGCGAACA TCATCGAGAC CCTGCTGTAG
 
Protein sequence
MALSTVVFDF DGTLHDSMQV YPRALKAVCQ GLMDRGLVER REMGDGEIAG YIGLTTKEMW 
QTFAPDLDEA TQRQSGIEVG RTMDELIANG ESKLYDGVPD MLQRVFDMGL DLVFLSNCRI
AYQEVCRKAF GMDAWFSAYY NSEEAHDLPK EVIFERIAEV FDGDYLIVGD RDKDLQIAQV
HGLPSIGCLY GYGSREELAC ATYLVESPGD VANIIETLL