Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_07030 |
Symbol | |
ID | 8394595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 819692 |
End bp | 820189 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644985465 |
Product | crossover junction endodeoxyribonuclease RuvC |
Protein accession | YP_003143111 |
Protein GI | 257063439 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0817] Holliday junction resolvasome, endonuclease subunit |
TIGRFAM ID | [TIGR00228] crossover junction endodeoxyribonuclease RuvC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000194314 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.296999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGTATG TTGAAAACCG CACCATTCTG GGCATCGACC CCGGCCTTGC CAACACGGGG TGGGGTGTCA TCCGCCAGCG CGGCCCGCGG CTTTCCTGCG TCGCGTACGG ATGCATCTCA ACATCGGCCG ACATGGATCT GCCGAGCAGG TTGCTCAAAC TGCATGACCA GATGGAGCTG GTGGTCAAGC GGTTCGAGCC GACGTGTCTC GGTATTGAAA CCATTTGGTT CGGCGCCAAT GTAACGGCAG GCATCCTTAC CAGCCAGGCC CGCGGGGCGG TGCTCGTAGC GTGCGCGAGC CAGGGGCTTT CCATCGGCGA ATTCACGCCC AAGCAGATAA AGCTTGCTGT GGTTGGTGAG GGGAATTCCG ACAAAATGCA GGTCCAGTAC ATGGTCAAGC AGCTGTTATC GTTGGACGAC CCGCCGCATC CCGACCACGC GGCCGATGCG TTGGCGGCGG CCATCTGCTA CGTGACGCAC GGCCCCCGAA CAGCTTAA
|
Protein sequence | MPYVENRTIL GIDPGLANTG WGVIRQRGPR LSCVAYGCIS TSADMDLPSR LLKLHDQMEL VVKRFEPTCL GIETIWFGAN VTAGILTSQA RGAVLVACAS QGLSIGEFTP KQIKLAVVGE GNSDKMQVQY MVKQLLSLDD PPHPDHAADA LAAAICYVTH GPRTA
|
| |