Gene Shel_06940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06940 
Symbol 
ID8394586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp811312 
End bp811776 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content64% 
IMG OID644985456 
Producthypothetical protein 
Protein accessionYP_003143102 
Protein GI257063430 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.128993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGGT TGCCTGCGGT TGCGGTAAGC GCATGCTTGG CGGGGGAGCG CTGCACCTAC 
AAGGCGTCGA GCAACCTGAT CGAAGGATAC GGCGAGCTGG CGGTCCTGTG CCGTCCCGTG
CTCGTGTGCC CCGAGGTGAT GGGCGGCCTG GCCACGCCCC GCGATCCGGC CGAAATCCAG
GGCAACAAGG TGGTGTCCTG CCGCGGCACC GATGTCACTT GCGAATACGA GCGGGGAGCC
GCCGAGGCGC TGCGCCTGGC TCAGGAAGCC GGGTGCGCCT TCGCCTTGCT TAAAGAGAAC
AGTCCCTCCT GCGGATGCGG CCATGTTTAC GACGGCACCT TCTCCCATAC GCTTGTGGAA
GGGGACGGCA TCACGGCTCG CGCGTTCAAA CGCGAAGGCA TTGCCACCTT CGGCGAATCG
CAGATTGACG CCCTTATCGA AGCCATCCAT GCCGAAAGGC TTTAA
 
Protein sequence
MDRLPAVAVS ACLAGERCTY KASSNLIEGY GELAVLCRPV LVCPEVMGGL ATPRDPAEIQ 
GNKVVSCRGT DVTCEYERGA AEALRLAQEA GCAFALLKEN SPSCGCGHVY DGTFSHTLVE
GDGITARAFK REGIATFGES QIDALIEAIH AERL