| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06890 |
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| Symbol | |
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| ID | 8394581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 805730 |
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| End bp | 806392 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985451 |
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| Product | amino acid ABC transporter membrane protein |
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| Protein accession | YP_003143097 |
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| Protein GI | 257063425 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.161215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.254709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCGG CCGTAGTGTC CGCAATGTGC ACGACGCTCG TCTCCGGCTT CGGGATGACC
GTGAGAATCT TCATCATCAC CCTTATCGGC GCGTTGCCGT TAGGTGTCGT CGTGGCGTTG
TGCCGTATGA GCAGTTTCAA ACCCTTGGCG TTGCTTGCCC GCATCTACGT CTCGATCCTG
CGCGGTACGC CGCTCATGCT GCAGCTGTTC GTGTGGATGT TCGCACCGTA CTACATGTTC
GGGCTGTCTT TCGGCCCCGG CTGGACCATG ACCGCTTGCT CCATCGGCTT CATCCTGAAC
TACAGCGCGT ACTTCGGCGA AATCTACCGC TCGGGCATCC AATCCATCCC GCGCGGCCAG
TACGAGGCCG CCGAGGTGCT GGGATACACG AAGGTACAGA CCTTCATGTA TATCATCTTG
CCGCAGGTCA TCAAGCGCAT CCTGCCTGCC ATGGGCAACG AGATCATCGC GCTGGTCAAG
GACACGTCGC TGGCATTCGT GCTCGGCGTC GCCGAAATGT TCACCTTCGC CAAGGCCCTG
GCGGCCAAAC ATGTGAGCAT GCTTCCCTAC GCCATTGCGG CGGTCATCTA CTGGATCTTC
ACGCTCTTCG TCGAGTTCGT CCTGAACAAG ATCGAGAAGA GCATGAGCTA CTACCACGAC
TAA
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| Protein sequence | MDPAVVSAMC TTLVSGFGMT VRIFIITLIG ALPLGVVVAL CRMSSFKPLA LLARIYVSIL
RGTPLMLQLF VWMFAPYYMF GLSFGPGWTM TACSIGFILN YSAYFGEIYR SGIQSIPRGQ
YEAAEVLGYT KVQTFMYIIL PQVIKRILPA MGNEIIALVK DTSLAFVLGV AEMFTFAKAL
AAKHVSMLPY AIAAVIYWIF TLFVEFVLNK IEKSMSYYHD
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