Gene Shel_06850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06850 
Symbol 
ID8394577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp801309 
End bp802016 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID644985447 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003143093 
Protein GI257063421 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.224601 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACCG AATTCGTACG ACGCGAACGC GCCATGAACG AGAAGGAGCC GTGGTGCGTG 
ACCGATGAGG CCGCCATGCG GGAAATGCTT GACGACGAGG ACTTTCGCGC GGCGTTCGCA
GGCGCCATGC GACTTCTGGG AACCATCTTC CTTTTGCGTC CCATCCACGG CGAGGCCCTG
GAGGCCGTCC AGGCTCTGGA GGTCATGGAC CTGCGCGCGG ATTGGCCTTT TGGGACAGAA
GACCAGCTTG ATCAGGCCCA AGGACTGTTG CGGGCCGGTG CCAACGAAGA CCTGTACAAG
CGCGACCTGG AGTTCATGCG CCTCTTCCGC GGTACGGGAA ACCGCAAGGC GGCTCCGTAC
GGTTCGGTCT ACATGGACCA TGACCGCGTG CTGTTCGGCT GGACGTGGAA CGCGCTTCGC
GACTGGATGC GCAGCAACGG CGTGACCACG CTCTACCAGG AACGCGAGCC CGAGGACCAG
ATCGGTCGCA TGATGCTGCT GGCTGCGGAG CTTTCCGACA GCCGCCCCGA CCTGCTGCCG
GAATTCCTGG GCGACCACTT CCTGCCCTGG GCCGACCATT TCCTGGAGCT GTTCCAGGCG
GACACCCAGT CCTTCACCTA CACGGGTGCT GCGGTGCTTG CGCGCCTGAC CTTGGACGAC
GTGGCGCATC TTCTGGCTGT CCAACCTGCC CGGCGCCGGT TCTTCTAA
 
Protein sequence
METEFVRRER AMNEKEPWCV TDEAAMREML DDEDFRAAFA GAMRLLGTIF LLRPIHGEAL 
EAVQALEVMD LRADWPFGTE DQLDQAQGLL RAGANEDLYK RDLEFMRLFR GTGNRKAAPY
GSVYMDHDRV LFGWTWNALR DWMRSNGVTT LYQEREPEDQ IGRMMLLAAE LSDSRPDLLP
EFLGDHFLPW ADHFLELFQA DTQSFTYTGA AVLARLTLDD VAHLLAVQPA RRRFF