Gene Shel_06840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06840 
Symbol 
ID8394576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp800652 
End bp801284 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content62% 
IMG OID644985446 
ProductDMSO reductase, iron-sulfur subunit 
Protein accessionYP_003143092 
Protein GI257063420 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.136395 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGGGGT TCTTTTTCGA CAACAGCCGC TGCACCGGTT GCCGAACCTG CGAAATGGCC 
TGCGTGGACT ACAACGACTT ACCTGCGGGC CGCAAATACC GGCGGATCAT CGACTACGAA
GGCGGAACCT GGATCGACAA CGGCGACGGC ACCTTCTCGA CCAGTGCGTT CTGCTACCAC
ATCTCGCTGG CATGCAACCA CTGCGCAAAC CCCGAATGCG TCCATGTATG CCCGACCGGC
GCCATGCATA AAAACGACCT GGGTCTTGTG GTGGTCAACA ACGAACGCTG CGTGGGCTGC
GGATACTGCA CCATCGCCTG CCCGTACCAC GCGCCGTCCA TCGACCCGAT CCTGCGCCAG
AGCTCGAAGT GCCACGGCTG CTCGGACCGC GTGGCAGCCG GCAAGCGCCC CATCTGCGTG
GAGGCCTGTC CGCTGCGGGC GCTGGACTTC GGCGAGGTCG ACGATCTGAT CGCGCGGCAC
GGCACGTTCG ACGCGAACAT CCTGCCGTTG CCTGATTCGA AGCTGACCAG CCCGAACCTG
ATGGTGAAAA AGTCGCCGGC CGCCGATTCC GAAATGGCCG AAGAGGGCAG CGTCGTCAAC
TGGCTCGAGA TTGAGAACAA CCACGAGGAA TAA
 
Protein sequence
MLGFFFDNSR CTGCRTCEMA CVDYNDLPAG RKYRRIIDYE GGTWIDNGDG TFSTSAFCYH 
ISLACNHCAN PECVHVCPTG AMHKNDLGLV VVNNERCVGC GYCTIACPYH APSIDPILRQ
SSKCHGCSDR VAAGKRPICV EACPLRALDF GEVDDLIARH GTFDANILPL PDSKLTSPNL
MVKKSPAADS EMAEEGSVVN WLEIENNHEE