| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06830 |
|---|
| Symbol | |
|---|
| ID | 8394575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 799827 |
|---|
| End bp | 800471 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644985445 |
|---|
| Product | DMSO reductase, iron-sulfur subunit |
|---|
| Protein accession | YP_003143091 |
|---|
| Protein GI | 257063419 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.227364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAT ACGGATTCTA CTTCAACAGC GCACGCTGCA CCGGTTGCCG TACCTGCGAA
ATGGCGTGCA AGGACAACAA GGACCTGGCC GAGACCGTGG CCTTCCGCAA GATCTTCGAC
TACGAGGGCG GCGATTGGAC CGACAACGGC GACGGCACCT TCACCCAGAC CGCCTTCGCA
TACCACGTAA GCGCCGCCTG CAACCATTGC GCGAACCCCG CCTGCGTGGC CAACTGCCCG
ACCGGCGCCA TGCAGAAGGA CCCCGAGACC GGCATCGTCC AGTCCGATCC TGAAGTCTGC
ATCGGCTGCG GCACCTGCGC GAACACCTGC CCCTACAGCG TGCCCGTCAT CGTGGAGCAG
AAGTCCCGCA AGTGCGACAT GTGCCGCGAC CGCGTGGCCG CCGGCCTGCG TCCCATCTGC
GTCGACGCCT GCCCGCTGCG CGCCCTGGAT TGGGGCGACA TCGAGGAGCT CAAGACCAAG
TATCCCGACG CCGTCGACGG CATCGCGCCT CTGGCCGATC CTTCGCAGAC CACCCCGTCC
ATCCTCATCG GCACCTGCCC TGCCTGCAAG GAGGTCGGCG ACACCACCGG CATGGTGAGC
AACCAGAAGG AAATCGACCT GGAGCCCGCC CGCGAAATCA TCTAA
|
|---|
| Protein sequence | MTQYGFYFNS ARCTGCRTCE MACKDNKDLA ETVAFRKIFD YEGGDWTDNG DGTFTQTAFA
YHVSAACNHC ANPACVANCP TGAMQKDPET GIVQSDPEVC IGCGTCANTC PYSVPVIVEQ
KSRKCDMCRD RVAAGLRPIC VDACPLRALD WGDIEELKTK YPDAVDGIAP LADPSQTTPS
ILIGTCPACK EVGDTTGMVS NQKEIDLEPA REII
|
|---|
| |