| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06820 |
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| Symbol | |
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| ID | 8394574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 797266 |
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| End bp | 799803 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985444 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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| Protein accession | YP_003143090 |
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| Protein GI | 257063418 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.460369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGA ACGACGAGCT TACCGTCTCG CGCCGTAAAT TCGTGAAGGG CTCGTTCGCG
GGCGCCGTTG CGACCGCCGG CGTTCTGGGC GGTGCATCCA TGTTCGGCTG CTCGCCGAGC
GAAGAGGGTG GAGAAACGAC CGCACCCGAA AGCGCCGAGG AAGCCGCAAG CATGCCGGCT
CCTAACGCAC TTCCCGAGGA CACCATCACC TGGTGCCAGT GCAATGTCAA CTGCGGCGGT
AACTGCGTGT TCCAGTGGCA TTCCCAGGAC GGCAAGGTCA CCTATATGGA GACCGACAAC
ACGGGAGACG ACGAGAACTT CCAGGCCCGC GCCTGCCTGC GCGGCCGCAG CATGCGTCGC
TGGCTGAACA GCTCCGAGCG TCTGCTCTAT CCCATGAAGC GCGTGGGCAA GCGCGGTTCC
GGCGAGTTCG AGCAGATCAC GTGGGACGAG GCTCTGGACC TGCTGCATGA CAAGCTGCAG
TACACCATCG ACACGTGGGG CAACGAGGCC ATCTACCGCA TCTACGCCAC CGGCATGTAT
TCGACCACCG GCAATCCGTC CAAGCGTTTC CTGAACTGCA TCGGCGGCTG CGTTGACCAG
CTGTACGACT ACTCCACGCA CATGCTGCAG GCTATTATGC CCTTCATGTA CGGCACCCAG
TTCTCGCCCT ACGACAACGT GCACGCCTCT TCCTTCAGCG AGGCCGAAGC CAACTCCGAC
CTGGTGGTCA TGTTCGGCAA CTCTCCGGCA GAAACCCGCA TGGGCGGCAT CAACGCCGTG
TGGGACTTCG CCAAGGTGCG CGAAGCCGTC CAGTCCCGCG GCGGCAAGAT CGTCAACATC
GACTATCGTC TGAACGAAAC CTCTTCGGGC CATCCCGAAG AGTGGCTGCC CATCCGCACC
GGCACCGACG CCGCGCTGTG CGCAGCCCTC ATCCATGAGT TCATCGCCGA CGGCAAGACC
GACGAGGACT TCCTGTCCAC CTACTGCGTA GGATGGAACG AGGACACCAT GCCCGAAGGC
TCCAAGGGCA AGAACCTTTC CTACTACGAC TACATCATGG GTACCGGCTA CGACAAGGTG
GAGAAGACCC CCGAATGGGC CGCTCCCATC ACCCAGATTC CGGCCGACAC CATCCGCGCT
CTGGCCGCCG ACCTCGAAAA CGCCGAAGCT CCCTTCGTGG TGCAGGGCTG GGGTCCGCAG
CGCCACACCA ACGGCGAAGA GGCTTGTCGC GCCATCTGCA TGGTTCCCAT CGCGCTGGGC
AAGATCGGCC TTCCCGGCAC CAACACCGGC CAGCGTGAGG CCGAGCCGCC CATCTACCTG
GTCGGCAGCA TCCCCGGCGC CGACGAGAAC GGCCCCGTTA CCCAGGGCTG CTCCATCCTG
ATCCCCGTGT ACCAGTGGCT CAACGTCGTC GACCACGGCA CCGAGATGGG CGTGAAGAAG
GGCGGCATCG TCGATCCCGC AGGCGAGCTC GACGACAACG ACGGCATGCT CCACACGAAC
ATCCACTTCA TCTGGAACTA CGCCGGCAAC TGCATCACCA ACCAGCACGG CGACGCCAAC
AAGGTCTATG ATGTCCTCAA TTCCATCTCC GATGACGACC TGTTCATCAT GACCTGGGAT
ACCGTCATGA CCGACTCCGC GAAGTACTCC GACCTGATCC TGCCGGACGC CATGCGCTCC
GAGCAGATGA ACATGCAGAC CCAGGGCTAC GCCGAGTACT ACGCCGGCGT CACCGTCGGC
AACCCCGCCC AGGAAGCTCC CGGCGAGTGC CGCAGCTCCT ATGATGTGTT GGCCGATTTG
GCCGAACGCT TCGACATGCG CGATGCCTTC ACCAACGGCG GCATGACCCA TGACGACTGG
GTGAAGTACC TCTACGAGAA CAACTTCTCC GAGGCCTATG GCATCGAGAT GCCTACCTGG
GATGAAATCC TGGAGCAGGG CGTGTTCAAG CTGCCCGTCG ACCCCTCCGT CGGCCTGAAG
GCGTTCCGCG ACGACCCTGA GGCCAATGCC CTGGGCACCC CGTCCGGCAA GATCGAAATC
TACTCCGAGC AGCTCGCCGC CCTCAACGAT GAGTGGGAGC TCGAGTACGA GGACGAACCC
ATCCAGCCGC TGCCCATCTT CAACCCCGGC TTCCACGGCT ACGGCTCGGT GACCGATGAG
TATCCGCTGT ACTGCACCGG CTTCCATCAC AAGAGCCGCA CGCACAGCTC CTACGGCTTC
ATCCGCGAGC TCGAGCAGGT CGCCCGTCAG CAGCTGTGGA TCAACCCCAT GGACGCCGAG
GCCCGCGGCA TCGCCAACGG CGACCAGGTC ATCGTGACGT CGCCCGCAGG CCAGATCAAG
ATCGAGGCCA AGGTGACCTC CCGCATCGTA CCCGGCACGA TCGCCGTGCC CCAGGGTTCG
TGGCGCAAGG CAGATATGGA AGGCGACCGC ATCGACGAGG GCGGCTGCGT GAACACGCTG
TCCGTCTACC ATCCGACGCC GTACGCCAAG GGCAACGGCC CTGCCCATTC CATGATCGCC
GAAGTCGCCA AGGCTTAA
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| Protein sequence | MVKNDELTVS RRKFVKGSFA GAVATAGVLG GASMFGCSPS EEGGETTAPE SAEEAASMPA
PNALPEDTIT WCQCNVNCGG NCVFQWHSQD GKVTYMETDN TGDDENFQAR ACLRGRSMRR
WLNSSERLLY PMKRVGKRGS GEFEQITWDE ALDLLHDKLQ YTIDTWGNEA IYRIYATGMY
STTGNPSKRF LNCIGGCVDQ LYDYSTHMLQ AIMPFMYGTQ FSPYDNVHAS SFSEAEANSD
LVVMFGNSPA ETRMGGINAV WDFAKVREAV QSRGGKIVNI DYRLNETSSG HPEEWLPIRT
GTDAALCAAL IHEFIADGKT DEDFLSTYCV GWNEDTMPEG SKGKNLSYYD YIMGTGYDKV
EKTPEWAAPI TQIPADTIRA LAADLENAEA PFVVQGWGPQ RHTNGEEACR AICMVPIALG
KIGLPGTNTG QREAEPPIYL VGSIPGADEN GPVTQGCSIL IPVYQWLNVV DHGTEMGVKK
GGIVDPAGEL DDNDGMLHTN IHFIWNYAGN CITNQHGDAN KVYDVLNSIS DDDLFIMTWD
TVMTDSAKYS DLILPDAMRS EQMNMQTQGY AEYYAGVTVG NPAQEAPGEC RSSYDVLADL
AERFDMRDAF TNGGMTHDDW VKYLYENNFS EAYGIEMPTW DEILEQGVFK LPVDPSVGLK
AFRDDPEANA LGTPSGKIEI YSEQLAALND EWELEYEDEP IQPLPIFNPG FHGYGSVTDE
YPLYCTGFHH KSRTHSSYGF IRELEQVARQ QLWINPMDAE ARGIANGDQV IVTSPAGQIK
IEAKVTSRIV PGTIAVPQGS WRKADMEGDR IDEGGCVNTL SVYHPTPYAK GNGPAHSMIA
EVAKA
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