Gene Shel_06790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06790 
Symbol 
ID8394571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp793584 
End bp794222 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID644985441 
Productuncharacterized membrane protein 
Protein accessionYP_003143087 
Protein GI257063415 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.979895 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCAAGG GCTTCCTCAA ATTCCTCCTT GCGCTGCTGA TCGCCGCCGT TGTCGTGGTG 
GGCGGTCTCA ACGCTTGGGT CGTGATGTCC GCAACCACCG ACGACTATAC GTTGGAGCAG
GCACAGGAGC TGGACGTGCA GGCGGAATGC ATCGTCGTGC TGGGCGCCAG CGTGCTGCCG
GACGGCACGC CCTCCGACAT CCTGAAGGGG CGCCTTGACG CCGCCATCGC GCTATACGAA
AGCGGTGCGG CTCCCGTGAT CGTCATGTCC GGCAACGGGA CCGAATCCAA CTACGATGAG
CCTTTCCACA TGAAACAATA CGCCATCGAG CAGGGCGTTC CCGCCGATGC CATCGTGCTG
GACCGGGCCG GCTACCACAC GTACGACACC ATGTGGCGTC TGGCCAACAT ATACGGCGCC
GACAGCTGCA TCGTCATCAC CCAGGAATAC CACCTGTACA GGTCCGTGTT CGACGCCAAA
AGCTGCGGCA TGGATGCCGT CGGCGTCGTC AGCGACAACG GCACCTACAA CGACCAGTTG
TGGTACGACG TGCGCGAGGT GGCCAGCCGC TGCCATGACG GGTTTTTGGC CCTGGCTGGC
GCAGCCCCGG AAAACCAGAT CACGCCGTTC GAATACTAG
 
Protein sequence
MVKGFLKFLL ALLIAAVVVV GGLNAWVVMS ATTDDYTLEQ AQELDVQAEC IVVLGASVLP 
DGTPSDILKG RLDAAIALYE SGAAPVIVMS GNGTESNYDE PFHMKQYAIE QGVPADAIVL
DRAGYHTYDT MWRLANIYGA DSCIVITQEY HLYRSVFDAK SCGMDAVGVV SDNGTYNDQL
WYDVREVASR CHDGFLALAG AAPENQITPF EY