Gene Shel_06740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06740 
Symbol 
ID8394566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp787054 
End bp788574 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content59% 
IMG OID644985436 
Productinosine 5-monophosphate dehydrogenase 
Protein accessionYP_003143082 
Protein GI257063410 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0516] IMP dehydrogenase/GMP reductase 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.725577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTATT ACTACGACGA GCCGTCACGT ACATTCAACG AGTATTTGCT GGTTCCCGGT 
CATACCCCGG CGGATTGCAT TCCTGCCAAA GTCAGCCTGA AGACCCCTCT CGTCCGCTAC
CGCAAGGGAG AAGAGGAGTG CCCCATCTCT CTGAACGTTC CTATGGTTTC GGCAATCATG
GCTGCGGTTT CGGACGACAA CATGGCGGTC GCGCTGGCCA CCGAAGGCGG CATGTCGTTC
ATCTACGGCA ACCAGACCAT CGAGCAGGAA GCCGCAATGG TCGCTCGCGT GAAGGCCTAC
AAGGCAGGCT TCGTCGAGTC CGATTCCAAT CTGTCTCCTG AAATGACCCT GGGCCAGGTC
GTCGAGCTGA AGGAGAAGAC CGGCCACTCC ACCATGCCCG TCACCTCCGA CGGCACCGGC
ACGGGTAAGC TGCTCGGCAT CGTTACCGAG CGTGACTACC GCCTGTCTCG CATGAGCCTC
GATCTGCCGG TTTCTGAATT CATGACCCCG CTCGAGAAGC TGGTCACCGC TACCGAAGGC
ACGTCTCTCA AGGTCGCCAA TGACATCATT TGGGACCATA AGCTGAACTC TCTGCCCATC
GTCGACGACG AAGGCAATCT GAAATACCTG GTCTTCCGCC AGGACTACGA CACCCACAAA
GAGAACCCCC TTGAGCTGCT CGACGATGAG AAGCGTTATA TGGTAGGCGC GGGCATCAAT
TCCCGCGACT ATGCCGAGCG CGTTCCCGCT TTGGTGGAGG CCGGTGCCGA CGTGCTGTGC
ATCGACTCCT CCGAAGGCTT CTCCGATTGG CAGAAGATGA CCATCGAATG GATCCGCGAG
CATTACGGCA CCGATGTCAA GGTTGGTGCC GGCAATGTCG TCGACCGCGA CGGTTTCCGT
TTCTTGGCCG ACGCCGGTGC TGACTTCGTG AAGATCGGCA TCGGAGGCGG CTCCATCTGC
ATCACCCGTG AGACCAAGGG CATCGGCCGC GGCCAGGCCA CGGCTACCAT CGAAGTCGCA
AAGGCTCGTG ACGAATACTT CGAGGAGACC GGAATCTACA TCCCCATCTG TTCCGACGGC
GGCATCGTTT ACGACCATCA TATCTCCCTG GCTTTGGCCA TGGGCGCCGA CTTCGTCATG
CTGGGCCGTT ACTTCGCCCG CTTCGACGAG AGCCCGTCCC ACAAGGTCAT GGTCAACGGC
ACGTATATGA AGGAATATTG GGGCGAGGGT TCCGCCCGTG CCCGCAACTG GGGTCGTTAC
GATCTGGGCG GCAAGAAGTC CCTGTCCTTC GAGGAAGGTG TCGATTCCTA CGTCCCCTAC
GCCGGTCCGC TGAAGGACAA CATGGCGGTC ACGCTGTTGA AGATCAGGTC GACGATGTGC
AACTGCGGTG CACTGACCAT TCCCGAATTC CAAGATAAGG CGAAGCTCAC CGTTATCAGC
TCGACGTCCA TCGTCGAAGG CGGTGCGCAC GACGTCCTGT TGAAGGACAA GACGCCTTAC
GTCAGCAACG TCACGAACTA G
 
Protein sequence
MAYYYDEPSR TFNEYLLVPG HTPADCIPAK VSLKTPLVRY RKGEEECPIS LNVPMVSAIM 
AAVSDDNMAV ALATEGGMSF IYGNQTIEQE AAMVARVKAY KAGFVESDSN LSPEMTLGQV
VELKEKTGHS TMPVTSDGTG TGKLLGIVTE RDYRLSRMSL DLPVSEFMTP LEKLVTATEG
TSLKVANDII WDHKLNSLPI VDDEGNLKYL VFRQDYDTHK ENPLELLDDE KRYMVGAGIN
SRDYAERVPA LVEAGADVLC IDSSEGFSDW QKMTIEWIRE HYGTDVKVGA GNVVDRDGFR
FLADAGADFV KIGIGGGSIC ITRETKGIGR GQATATIEVA KARDEYFEET GIYIPICSDG
GIVYDHHISL ALAMGADFVM LGRYFARFDE SPSHKVMVNG TYMKEYWGEG SARARNWGRY
DLGGKKSLSF EEGVDSYVPY AGPLKDNMAV TLLKIRSTMC NCGALTIPEF QDKAKLTVIS
STSIVEGGAH DVLLKDKTPY VSNVTN