Gene Shel_06680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06680 
Symbol 
ID8394560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp779987 
End bp781000 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID644985430 
Producthypothetical protein 
Protein accessionYP_003143076 
Protein GI257063404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000220571 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGAAC AGCCGACTCG CAGGATTAAT TGGAAGCATG CCCTGGTCGC ATGCCTGGTG 
TTGCTTGCGC TGGTAGGAAG CATGGCCTTG TTCTGGTCGG ATTCTTTCGA AGGCCTCCTG
CCGTCAAAAC CAGAGGCCAG CACTGCTCAA CTCGACCAGA TTCCCGAATA CGACGGGCAG
CCCTATTCCA CCATTAACAA CAACGAGCCC GTGTTCACAT CTGACGAGCT GAAACGCAAT
ACATTCGAGG AGTATTCGGA GCTCGACTCG CTTGGACGAT GCGGAACCGC CTTCGCCCTG
GTGGGTGTCG AGACTATGCC GACAAGCGAG CGGGAGGACA TAGGGTCAGT CACGCCAAGC
GGATGGCGGA TTTGCCGCTA TGACGACCTG ATCGAGGATC GCTATCTATA TAACCGCTGC
CACATCATCG GCTTCCAGCT CACAGGAGAG AATGCGAATC CGCTGAATCT GTTCACGGGC
ACGCGCTATT TGAACGTGTC GGGCATGCTG CCGTTCGAAA ATGAAGTCGC AAGCTACGTC
CGCACCACAC GCAACCACGT CTTGTACCGG GTAACGCCCG TATTCGTCGG CAACGAGCTG
GTCGCACGAG GAGTTCACAT GGAAGCCGAA TCCGTCGAAG ACAACGGCAA AGGCATTAGC
TTCAATGTGT TCGTCCACAA TATCCAGCCA GGCGTAGAGA TCGATTATGC CACCGGCGGC
AGCTGGCGAG GCGACGACGC GGACGAGGTT GCCGCCGAAC TTGCGGCCCG ACTGTCTGCG
GAACAGGCAC CCTACTCTTC GGAAACCGAA CCCGATACGA CGCCTGAAAC GACCGTAAAA
CCCATCGACA TGTCGGAGTT CGATTACGTG GTGAACACGG GATCGAAGAG GTTTCACCTG
CCATCCTGCG AGTCGGTTGC CGAGATGGCC GAAAAGAACC GCGAAGGCTT CAACGGCACG
CGAGACGAGC TGCTAGAGCA AGGCTACGAG CCCTGCAACC GTTGCAATCC TTAG
 
Protein sequence
MEEQPTRRIN WKHALVACLV LLALVGSMAL FWSDSFEGLL PSKPEASTAQ LDQIPEYDGQ 
PYSTINNNEP VFTSDELKRN TFEEYSELDS LGRCGTAFAL VGVETMPTSE REDIGSVTPS
GWRICRYDDL IEDRYLYNRC HIIGFQLTGE NANPLNLFTG TRYLNVSGML PFENEVASYV
RTTRNHVLYR VTPVFVGNEL VARGVHMEAE SVEDNGKGIS FNVFVHNIQP GVEIDYATGG
SWRGDDADEV AAELAARLSA EQAPYSSETE PDTTPETTVK PIDMSEFDYV VNTGSKRFHL
PSCESVAEMA EKNREGFNGT RDELLEQGYE PCNRCNP