Gene Shel_06610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06610 
Symbol 
ID8394553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp772570 
End bp773238 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID644985423 
Producthypothetical protein 
Protein accessionYP_003143069 
Protein GI257063397 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTCC TCGATAATCT TTCTTCCAGC GTGAACCGCG GTGTCGCTTC CGCTGGCCGC 
ACTACTGAAA CGTTCAGGCT GAAGAACCAG CTCAACGACA TCAACAAGCA ACGTCAGGCG
CTTTCTGCAC AGCTTGGGGC CAGCCTGTAC GAAATGACAA GGGACAATCC CGAGTTGCGC
GCGGGTCGCG AAGGACTCTA CGACAGTATT GCCGCCTTGG ACGCCCAGCG CGACGCCATC
AATGCTCAAA TCGCCCAGAT CGAAGAGCAG CAGCGCCTCC AGCAAGCGCA GGCGCAGGTT
TTCATCTGCC CCAAGTGCGG CGGCCGAGTC GGTGCCACCG ACATGTTCTG CATGACCTGC
GGCCTTCCCA TCGATCAGGT CCGCGCCGCA GCAAGCGCAC CCGTCATGCA ACCTGGCCAG
GCTGCATGCC CCAAATGCGG GGCTCCCATG AATGCGGGGG ACACCTTCTG CATGAGCTGC
GGCACCAACG TGAAGGAATT CCAAGCCGCC CAAGCAACCT CTGCACCCGC GGCTCCTGCT
GCGCCGGTTT CGGCGCCCGC CGAGCAGCAA GCGTCTGCCG ACGGCGGCAC CGTATGCCCA
TCATGCGGCA CGCCCTACAC GCCTGGAGCC GATGCGTTCT GCGCCAATTG TGGTGCCAAA
CTCTCCTAG
 
Protein sequence
MGFLDNLSSS VNRGVASAGR TTETFRLKNQ LNDINKQRQA LSAQLGASLY EMTRDNPELR 
AGREGLYDSI AALDAQRDAI NAQIAQIEEQ QRLQQAQAQV FICPKCGGRV GATDMFCMTC
GLPIDQVRAA ASAPVMQPGQ AACPKCGAPM NAGDTFCMSC GTNVKEFQAA QATSAPAAPA
APVSAPAEQQ ASADGGTVCP SCGTPYTPGA DAFCANCGAK LS