Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06600 |
Symbol | |
ID | 8394552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 771836 |
End bp | 772402 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985422 |
Product | shikimate kinase |
Protein accession | YP_003143068 |
Protein GI | 257063396 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTGCA TGGCTGATGA GTACCAAGGC AAGTACAAAT TGCTCAAACC GGTATTTCTC ATCGGCTTTA TGGGTGCGGG GAAAACCAGC GTGGCACAGT ATCTGGCGAA CGTGCTCGGT TTGGCTTCCA TCGATGCCGA CGAGTATTTG GAACTAATGG AGGACAGGGT CATAGCGGAC ATCTTCGCGG AAGACGGTGA GGATTATTTT CGGGATATAG AGACCAGGCA CCTCGAGGAG CTGGCGAAGC GCAAGTTGGT GCGTCTGATC GCGACGGGCG GCGGCGTCAT CAAGCGTCCG GCGAACATTG AAATCATGCA TTCGTACGGC TATACGGTCT ACCTTGGCGT TACCGCAGAT GAAGCGGCCG AACGAATTCC GAACACCGAA TCGCGACCGC TTTTCAAGAA CATCGACGTG GCACGCAAGA CCGTGCTGGA GCGCATGCCC CTCTATGAGG CCGCAGCGGA TGCGTACGTG GAAACCACAG GCCGCAAGGT GCCCGACATT TGCCGGGAAG TTGCGTTGCG CCTGATAGAT TCCGGCGTGT TGGTGAAGGT TTCCTAG
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Protein sequence | MICMADEYQG KYKLLKPVFL IGFMGAGKTS VAQYLANVLG LASIDADEYL ELMEDRVIAD IFAEDGEDYF RDIETRHLEE LAKRKLVRLI ATGGGVIKRP ANIEIMHSYG YTVYLGVTAD EAAERIPNTE SRPLFKNIDV ARKTVLERMP LYEAAADAYV ETTGRKVPDI CREVALRLID SGVLVKVS
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