Gene Shel_06600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06600 
Symbol 
ID8394552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp771836 
End bp772402 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID644985422 
Productshikimate kinase 
Protein accessionYP_003143068 
Protein GI257063396 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTGCA TGGCTGATGA GTACCAAGGC AAGTACAAAT TGCTCAAACC GGTATTTCTC 
ATCGGCTTTA TGGGTGCGGG GAAAACCAGC GTGGCACAGT ATCTGGCGAA CGTGCTCGGT
TTGGCTTCCA TCGATGCCGA CGAGTATTTG GAACTAATGG AGGACAGGGT CATAGCGGAC
ATCTTCGCGG AAGACGGTGA GGATTATTTT CGGGATATAG AGACCAGGCA CCTCGAGGAG
CTGGCGAAGC GCAAGTTGGT GCGTCTGATC GCGACGGGCG GCGGCGTCAT CAAGCGTCCG
GCGAACATTG AAATCATGCA TTCGTACGGC TATACGGTCT ACCTTGGCGT TACCGCAGAT
GAAGCGGCCG AACGAATTCC GAACACCGAA TCGCGACCGC TTTTCAAGAA CATCGACGTG
GCACGCAAGA CCGTGCTGGA GCGCATGCCC CTCTATGAGG CCGCAGCGGA TGCGTACGTG
GAAACCACAG GCCGCAAGGT GCCCGACATT TGCCGGGAAG TTGCGTTGCG CCTGATAGAT
TCCGGCGTGT TGGTGAAGGT TTCCTAG
 
Protein sequence
MICMADEYQG KYKLLKPVFL IGFMGAGKTS VAQYLANVLG LASIDADEYL ELMEDRVIAD 
IFAEDGEDYF RDIETRHLEE LAKRKLVRLI ATGGGVIKRP ANIEIMHSYG YTVYLGVTAD
EAAERIPNTE SRPLFKNIDV ARKTVLERMP LYEAAADAYV ETTGRKVPDI CREVALRLID
SGVLVKVS