| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06580 |
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| Symbol | |
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| ID | 8394550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 769031 |
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| End bp | 770920 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985420 |
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| Product | predicted xylanase/chitin deacetylase |
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| Protein accession | YP_003143066 |
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| Protein GI | 257063394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCT ACGAATACCG CGGCAGGGAG TATCGCCGCC AAAAGCCCAC AAGGCGCAAG
CCCAAGGCAA AAACCGAGAA CGTCGGCAAT ATGGGAGCTT GGCCCGCATT CGCCGACGAC
ACCGATCCGA AAGCAGGCGG CGGTGCCTGG CCGCAAGCCA GCGACTACGC AGCCGACCTG
GACGAATGGA CGGCACAACG CGCAGATGAC GTTGAGGCCT CTTCCCGTCG GGCCGTTCCT
CGGCATGCCC CTGAGCAAGC CGCCACCACT GCACCGAAAT CGACGCCTAT CGGTCGCCAT
GCGCGCATCG CCTCCGATAC CGAGAACACC GCTGGGAATG CATCTGTCGC ACGGGCACGG
CACGCGGCGC ATGCAGCAGC AACCGGCCCT GTGGCCGTCT CTGCTCGATC AGCCGCCACC
ATCGGCCCCA CGGCACCTCG GTTCGCAGCC GCCAACACAC CTGCGGAACA GCCCGTAGAA
ACCCGAGTTC CGACACCCGC CATTGTGGAT ACGCATGCCA CAGCCGTCAT GACACCGTTG
GATGCCGCAA CCGCCAACAC CGAATCACCC TCCCCGGTCG TCGAAAACGA GCCGCTTGCT
TCCGAAGCTG GCAATCAAAA CGCCCGGCCT CAGAGGCCCT CGACCCGCAA CCACGGACTT
GTCGCTGACG ACGCCGGCGA TTCCGACCTG GTCGCCGCGG CCCCGGTTCC TTTCCAGCGC
ACACCCAAAC GCCGTTCCCG CAAAGGCCTT GTCGCTGCCG TGCTGGCCAT TGCCCTGATA
GCCATGGGGG CAGGCGGTTT CTTCATGCTG AATCGCGGAT CGGATGCAGA AACGAATGCG
ACACCCACGC CCGCAGTCAG CCAAAACCAG TCTGAAAACG CAAGCGCCTC CGACACCCAA
TCCACCGAAC CCGAAACGAC CGACGAAGGC TCCGGAACGT CTGCCGCAGC GCCCGCCGAT
CCCGGCGACA TCGTCATCGG GGTGAACGGC GACCCGGATA CCTACGTCCT GGTCGGCGAA
GAATACATTG AAGGCGGCGC CCATGCGGCG GAACCCATCG ACGGCATTCT CAACAACGCC
ATCGAAACCA ACGGGGACGT CGACACATCC ACGCCGGGCG ACTACGAAGT CACCTACACC
GTCAGCGACT CGACGGGCCA CACGGCAACG GCAACGCGCA CGGTCCACGT GGTCGACAGC
ATGGAGACCC AGGAGTATGG CATCCCGGTT CTCATGTACC ACTACGTCTA TACCGAAGAC
GATCTGCCCG ACGAGGTGAA CGTCAACTAC ATCCTCGACA CCGATCTGGC AAACCAGCTG
AATTACCTGC AGGAAAACGA TTTCTACTAT CCGTCGTACC CTGAAGTCCG AGCTTTCCTG
GAGGGCGCGC ATTCGCTGCC CGCCAAGAGC GTCGTGCTCA CGTTCGACGA CGGCCAGTCA
GGGTTTTTGG CGTACGGCAT CCCGCTTCTT GAAGAATACG GCGTGCCGGC CACGTCCTTC
GTCATCTGCA GCAACGACAA CGCCGAGTCC ATCCCTATCG ACCATGCGAG CCCTGTGATC
TCATACCAGT CGCACTCCTA CGCGCTGCAT CAGGGCGGCG GCAGCGTCGG GCACGGCGGC
ATCATCAGTG CGCTGTCCCA CGAAGACATC GTCGCCGATC TGAACCAGGC AAAGGAGATG
CTTCAGACCA GCGAAGCTTT CGCCTATCCC TACGGCGATA CCACGGATGA CGCCATGACC
TGCATCGACG AAGCCGGCAT CCTCTGCGCT TTCACCACTG AGAACCGCTG GGCACAAATT
GGCGAAGACT GCCGGGCGCT GCCCCGAGTC CGCGTTTCGG GCGACTACAG CTTCGACGGG
TTTGTATACC TGGTCACCAC ACCCCAATAA
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| Protein sequence | MASYEYRGRE YRRQKPTRRK PKAKTENVGN MGAWPAFADD TDPKAGGGAW PQASDYAADL
DEWTAQRADD VEASSRRAVP RHAPEQAATT APKSTPIGRH ARIASDTENT AGNASVARAR
HAAHAAATGP VAVSARSAAT IGPTAPRFAA ANTPAEQPVE TRVPTPAIVD THATAVMTPL
DAATANTESP SPVVENEPLA SEAGNQNARP QRPSTRNHGL VADDAGDSDL VAAAPVPFQR
TPKRRSRKGL VAAVLAIALI AMGAGGFFML NRGSDAETNA TPTPAVSQNQ SENASASDTQ
STEPETTDEG SGTSAAAPAD PGDIVIGVNG DPDTYVLVGE EYIEGGAHAA EPIDGILNNA
IETNGDVDTS TPGDYEVTYT VSDSTGHTAT ATRTVHVVDS METQEYGIPV LMYHYVYTED
DLPDEVNVNY ILDTDLANQL NYLQENDFYY PSYPEVRAFL EGAHSLPAKS VVLTFDDGQS
GFLAYGIPLL EEYGVPATSF VICSNDNAES IPIDHASPVI SYQSHSYALH QGGGSVGHGG
IISALSHEDI VADLNQAKEM LQTSEAFAYP YGDTTDDAMT CIDEAGILCA FTTENRWAQI
GEDCRALPRV RVSGDYSFDG FVYLVTTPQ
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