Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_06550 |
Symbol | |
ID | 8394547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 766697 |
End bp | 767464 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985417 |
Product | 3-dehydroquinate dehydratase, type I |
Protein accession | YP_003143063 |
Protein GI | 257063391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCGC TGGTCATCAA AGATGTTTCA ATAGGAGAAG GCGCGCCGAA GACCATCGTC TCCGTTATGG ATGCGACTAC CGAAGGAGCC TTGGCCACCA TCGACCAGGG CCTTGCGGCC GGCGTCGATT GCTTCGAGTG GCGCGTCGAT TTCAGCGAGA ACGTGCACGA CCCCGCGGCC GCTGCGGAAG AATCTCGGGT GCTGGCTCAG GCATTGCCGA AAAACCCTCT GTTGTTCACC TTCCGCTCCA CCAGCCAGGG CGGCCAGTTG ACGATACCGG TCGAAGAATA CGTGGCCCTC AATAAAGCGG TCATCGAGGC CGAGGCCATC GATATGGTGG ACATCGAAAC TTGGATAGGC GATGCCGCTG TGTCGGACCT GGTAGCCTGC GCCCATGCCC ATGGGGTTGC CGCCGTTGTC TCGTATCACA ATTTCGCAGG CACGCCTTCC AAGGATTGGA TGGTTGCCCT GCTCACGCAT ATGCAAGACC TGGGCGCGGA CATTCCTAAG ATCGCCGTCA TGGCGAAGAC ACCTGCCGAC GCGCTTGAGC TGCTGGCCGC CACTGAAGAG ATGGCGCGCT TGCATGCGCA GGGTCCGCTG CTGACCATGG CGATGGGGCG TGACGGCTCC ATTACACGGC TTGCGGGCGA GCTTTTCGGT TCGGCGCTTA CGTTCTGTGC ACTTGAGAAT GCTTCCGCAC CTGGTCAGGT TGATGTGTCG CAAGCCCGTC GCATCATGGC TGACCTACAT GAGGTTCTGG GTAAATAA
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Protein sequence | MKPLVIKDVS IGEGAPKTIV SVMDATTEGA LATIDQGLAA GVDCFEWRVD FSENVHDPAA AAEESRVLAQ ALPKNPLLFT FRSTSQGGQL TIPVEEYVAL NKAVIEAEAI DMVDIETWIG DAAVSDLVAC AHAHGVAAVV SYHNFAGTPS KDWMVALLTH MQDLGADIPK IAVMAKTPAD ALELLAATEE MARLHAQGPL LTMAMGRDGS ITRLAGELFG SALTFCALEN ASAPGQVDVS QARRIMADLH EVLGK
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