| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06470 |
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| Symbol | |
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| ID | 8394539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 753619 |
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| End bp | 755388 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985409 |
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| Product | alpha-galactosidase |
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| Protein accession | YP_003143055 |
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| Protein GI | 257063383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCA TACGCTGCTT TGTTTCATAC CGCCTTGTCG GCGAGTCCAA CGAAAAAGCT
CGGCGCACCT TGGTGAAGAT TCTCGATTCA GAATCGGAAG CCCCATCGGA TGTAGAACCG
GAAGATGAAC CGAAGACCAT AAACGCCGAA ACGGTGAAGA TGTACACCGA CGCGATTCGT
GCCGCTGAAA AACAGGACGC AATGCCTGAT GCCGAAGTGC AGGACGACGA GGACGAAGGT
TCGCCAAAGC GAAACATCAG CATCAACTGC ACCTTCGACC AGGAGGTGTT CTCCGTTTCC
GTCGACGTCA TGAGCGACGT GCGCATCGAA TCCTGTATGG TCGTATGGTC CCATGAGTTC
AGTAACGACG AACGCATTCT TCTGAACGGA TGGCAATCTT GGACCGACAC GCAGGAATTG
CCTATCGATG GGTACATGCG CGGCCTGAAA CGCGTGCCTG CACCGCTTAT CCGTCGTTTC
GTGCTGGATG GCTCGGGCGA CTACCGCTTT ACCGAATACA CAAACAAGCC CGGACAGCTT
CACGGATGGA CGTACGGGTA TATTCGTGAC GACCGAACGT GCACGCTGAT TGCCGGTCTT
GACGAATCCC GCGGGTTCAC CCACATCCGC ACCGACTGCA AGGAGAACCT CCTCTTCGTC
CTGCCGGAAG CACCCGCCCG TGAATTCAAG GATGGCGACA CCGTCGAATT CGGAAGATTC
GCCGTCATAG AACGCACCGA CGCGGAGGAC GTGGACAAGG CGACCGAGGC CGCCTTCGAT
CGCTGGTTCG AACTAAACGG CATCCAAGCC CGCACTTGCA AACCGGCCTG CGGATATACC
ACCTGGTACC GTCATTACGG ACGCATCAAT GAGACCGTCC TGTGCAGGGA TTTCGACGCC
GTCAGAAGCG TGTTCGAGCG CGTCGACGCT TCGGGATTCG AACGTGTATT CCAAATCGAC
GACGGTTTCT GCAAAATTGG AGACTGGCTG GATGTCGATC GGAAATGCTT CCCAGCCGGT
CCAGCACCAA TGGCGCAGCA CATCTCCAGA AAAGGATTCA CCCCCGGCAT CTGGCTCGCC
CCGTTCGCCG TTGAGAAAGA CGCCAGAATC GGCCACGAGC ACCCCGACTG GGTGCTTTGC
GACGAGAAAG GCAACGCCGT TACCATTGGC AGCAACTGGA GCGGCGCATA TGCCCTCGAC
ACCCGCAACC CAGAAGTTCG CGCCTACGTA ACCGAGGTAA TTCGCACCTA CACCCAGGAC
TGGGGATTCA AACTGCTGAA GCTCGACTTC CTGTATGCAG CCTGCATGAT TCCCCATGAC
GGCATGAATC GCGGCGAGCT CATGGCCGAT GCCATGCGCC TTTTGAGGGA TGCCGCTGGA
GAAGACGTGC TTATCGACGG ATGCGGCGTG CCCTTGGCCA GCGCATTCGG GCTGGTCGAC
TACTGCCGAA TCAGCTGCGA CGTCGGAAAC GACTGGGACG ACCTGCCCAG CCGCCGCATG
CTGCACCGCG AGCGCGTCAG CACCAAACAC AGCGTTTCCA ACACCGTATG GCGCGCACAT
CTGAACAGGC GAGCCTTCCG CAACGACTCT GACGTCGTCT ATCTGAGAAC CGACGTGCAA
CTGAACATGG AGCAGCGCAC CATGCTGCTC GATCGCAGTG CGGTGTTCAG CGGCGTACTG
TTCACCTCTG ACAACATGGG TGCCTGGGAC GACAATCAGA TTGAACGTTG GCAGAACGCC
ATCGATCTCA TGAGATTGGC CAACCGATGA
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| Protein sequence | MRPIRCFVSY RLVGESNEKA RRTLVKILDS ESEAPSDVEP EDEPKTINAE TVKMYTDAIR
AAEKQDAMPD AEVQDDEDEG SPKRNISINC TFDQEVFSVS VDVMSDVRIE SCMVVWSHEF
SNDERILLNG WQSWTDTQEL PIDGYMRGLK RVPAPLIRRF VLDGSGDYRF TEYTNKPGQL
HGWTYGYIRD DRTCTLIAGL DESRGFTHIR TDCKENLLFV LPEAPAREFK DGDTVEFGRF
AVIERTDAED VDKATEAAFD RWFELNGIQA RTCKPACGYT TWYRHYGRIN ETVLCRDFDA
VRSVFERVDA SGFERVFQID DGFCKIGDWL DVDRKCFPAG PAPMAQHISR KGFTPGIWLA
PFAVEKDARI GHEHPDWVLC DEKGNAVTIG SNWSGAYALD TRNPEVRAYV TEVIRTYTQD
WGFKLLKLDF LYAACMIPHD GMNRGELMAD AMRLLRDAAG EDVLIDGCGV PLASAFGLVD
YCRISCDVGN DWDDLPSRRM LHRERVSTKH SVSNTVWRAH LNRRAFRNDS DVVYLRTDVQ
LNMEQRTMLL DRSAVFSGVL FTSDNMGAWD DNQIERWQNA IDLMRLANR
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