Gene Shel_06440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06440 
Symbol 
ID8394536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp750034 
End bp750531 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID644985406 
Producthypothetical protein 
Protein accessionYP_003143052 
Protein GI257063380 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGAGG ATAAATGGAG CAGGTTCGCA GAGGAGACGT TCGGCGAAGG CGCAACTATG 
GATGACATCA TCCTGCATGG GCTGACCCAT ACGATGGGGT TGTCGGTGCA GGAGGTCAGG
GACGGATACG TACGACTGGC GATGCCTGTG ACAGAAGATC TTGTTCAGCC GCTGGGCTTC
CTCCATGGAG GGGCGACGCT GGCCCTGCTT GAATCTTGCG CGAGCTGCGC ATCCATGTTG
CGCGTCGATC CCGACACCCA CTATTCTTTC GGGTCCGGCA TCGAGGCCAA GCATATCAAC
AGCGTCCAGG TGGGCGAGAC CGTCATCGGC GAGGCTCAGC TGAATCGGAC CGAAGATCTG
GGCGAGCGTG GTTTGAAAGA GTATTGGGAC ATCAAAGCCA CCACAACCGA AGGCAAGCTG
GTCTGCACGG GCGTCTTCAA AGAACGGATT GTTTCCAAGG AGTATTTCGA GAAGCGCAAT
AAAGAACAGC ATGCTTAA
 
Protein sequence
MHEDKWSRFA EETFGEGATM DDIILHGLTH TMGLSVQEVR DGYVRLAMPV TEDLVQPLGF 
LHGGATLALL ESCASCASML RVDPDTHYSF GSGIEAKHIN SVQVGETVIG EAQLNRTEDL
GERGLKEYWD IKATTTEGKL VCTGVFKERI VSKEYFEKRN KEQHA