| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06400 |
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| Symbol | |
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| ID | 8394532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 745726 |
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| End bp | 747606 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985402 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003143048 |
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| Protein GI | 257063376 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.199854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG CGTTGATTTC CCAGCCCCGC GAGGTGCTGA AACGGTATTT CGGATACGAC
GGGTTCCGTC CCAACCAGCA GCAGGTGGTG GATGCCATCC TGCAGGGTAG GGACGTGCTG
GCCGTCATGC CGACGGGCGC GGGCAAATCC ATCTGCTACC AGGTGCCGGC TATGTGCCTT
ATGGGTTACA CGCTGGTGGT GTCGCCTTTG ATATCCCTCA TGAAAGACCA GGTCAACGCC
TTGGATGCTG CAGGGGTGCC GGCGGGATGC ATCAACAGCT CCGTCAGTGC CGCAGGCCGT
CGCGAAGCGG TGCAGGGCGT TATGGACGGC TCCGTCAAGC TTCTGTACGT GTCGCCGGAG
CGTTTGGAGA CTGAAGAGTT CCGCGATTTG TGCGCGAACT TCCCGCCGCA GATGATCGCT
ATCGACGAGG CCCACTGCAT CTCGCAATGG GGCCATGATT TCAGGCCGAG CTACATGCGG
CTGCGCAGGT TCATCGAGTC GCTGCCCCAG CGCCCGCCGG TATGCGCCTT TACGGCGACG
GCTACCGAGC GCGTGCGCCA GGACATCCTC GAACAGCTGG CGTTGCGCGA CCCCTTTACG
GTGGTGGCGA GCTTCGACCG TCCCAACCTG CGGTTTTCTG TCATCCGTCC CCGCGAGCGC
GACAAGGACA AGCGGCTGCT GGAGCTTTTG GAAAAGCACT CCGGCGAAAG CGGAATCATC
TACTGCAGCA CCCGCAAAGC GGTGGAGGCG GTGTACGACC TGCTGTGCGA GAAGGGCATC
AGCGCTGCGC GTTACCATGC AGCGCTGCCG CAGGCCGAAC GGCGGGCCAG CCAGGAGGAT
TTCATCTACG ACCGTGCGTC GGTCATTGTG GCCACGAATG CGTTCGGCAT GGGCATCGAC
AAATCGGACG TTCGCTTCGT CATTCACTAC AATATGCCGC TTGACCTGGA GGAATACTAT
CAGGAGGCGG GGCGTGCCGG GCGCGACGGC GAACCTGCCG AGTGCGTGCT TCTGTACACG
CCGAAGGATG TGAAGACCGC CGAGTTCATG GTCATCCGCA GCAAAGACGA AGCCGATCTT
GACGCTGACA CCCGCTATGA GCAGGTGCAA CGCGCACAGG ATCGCCTGCG TCAGATGACG
TTCTATTCCA CCACGTCGGA CTGCCTGCGC GGCTTCATCC TGAAATACTT CGGCGAAACG
GCACCAGGGT ATTGCGGAGC GTGCGGCAAT TGCGAAACCG AGTTCGAGGA TCGGGATGTG
ACCGAAGACG CGCAGAAGAT CATCAGCTGC GTGTACCGGT TGCAACAACG CGGCCGGCAG
CTTGGGCGGG CGGCCATCGT GGACATCCTG CGTGGGTCCA AAACCGAGCG TATCACCCAG
AACGGATTCG ACACGCTGTC CACCTACGGG TTGTTGGCGG ACGAGTCCAA AACCCACGTG
CGCTTCGTAA TGGAAGAGCT GATTAACCGC GAAATTCTCG GCGTGACGCA CGGGCAGTAC
CCGCAGGTCG TCTTCACGCA GAGCAGCGGC GAGTTCTTGC GCAACGGGGA GCCGTTCGTC
ATCAAGGTGC CCAAGGAGAA GCCGAAGCAA GGCCTGGTCA AGGACAAGCG AAAGAACGGC
CGTTGGGTGT ACGGTGACGA GCCTGTGGAT AAGGACCTGT TCCAGAAACT GCGGGAGGCC
CGAGCCCATC GAGCCGCGAT GCTGGGGTAT CCGGCGTACG TCGTGTTCAA CGATGCGACC
CTTGCGGATA TGTGCAGGCG CATGCCGGTG ACACGTGAGG AGCTGCTGGA GGTGTCGGGC
GTGGGCGAGG CCAAGGCCGC GCGTTACGGC GAGGAGTTCA TGGACATCAT CCGCACACAT
AAGGAACAGC ATGGCCTGTA A
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| Protein sequence | MADALISQPR EVLKRYFGYD GFRPNQQQVV DAILQGRDVL AVMPTGAGKS ICYQVPAMCL
MGYTLVVSPL ISLMKDQVNA LDAAGVPAGC INSSVSAAGR REAVQGVMDG SVKLLYVSPE
RLETEEFRDL CANFPPQMIA IDEAHCISQW GHDFRPSYMR LRRFIESLPQ RPPVCAFTAT
ATERVRQDIL EQLALRDPFT VVASFDRPNL RFSVIRPRER DKDKRLLELL EKHSGESGII
YCSTRKAVEA VYDLLCEKGI SAARYHAALP QAERRASQED FIYDRASVIV ATNAFGMGID
KSDVRFVIHY NMPLDLEEYY QEAGRAGRDG EPAECVLLYT PKDVKTAEFM VIRSKDEADL
DADTRYEQVQ RAQDRLRQMT FYSTTSDCLR GFILKYFGET APGYCGACGN CETEFEDRDV
TEDAQKIISC VYRLQQRGRQ LGRAAIVDIL RGSKTERITQ NGFDTLSTYG LLADESKTHV
RFVMEELINR EILGVTHGQY PQVVFTQSSG EFLRNGEPFV IKVPKEKPKQ GLVKDKRKNG
RWVYGDEPVD KDLFQKLREA RAHRAAMLGY PAYVVFNDAT LADMCRRMPV TREELLEVSG
VGEAKAARYG EEFMDIIRTH KEQHGL
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