Gene Shel_06240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06240 
Symbol 
ID8394516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp728164 
End bp729474 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content62% 
IMG OID644985386 
Productphenylacetate-CoA ligase 
Protein accessionYP_003143032 
Protein GI257063360 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.57467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGC AAGATGCTAT ATTGCGCATG CCGCATGAGC AGATAGAAGA GATTCAGCTC 
GCCGGCATCA AGGAGACCGT TGTCAAGTGC TACGAGAACG TGCCTTTCTA TAAGAAGACC
TTCGACGAGG CCGGATTCGA CCCCTACGCA ATCGAGACAC TGGAAGACAT CCAGAAGGCG
CCCTTCCTCA CCAAGCAGGA CCTGCGCGAC AACTACCCGT ACGGCCTGTT CGCTGTGCCG
CTGAAGGACG TCCGCGAGAT TCACATGAGC TCCGGCACCA CCGGCATCGC CACCGTGGGC
GGCTATACCG AACACGACCT GGAGATTTGG GGCGAATGCT TCGCCCGCGG CATCGAATAC
GCCGACGGCG GCGAGAACGA CGTCTGCCAC GTCTGCTACG GCTACGGCCT GTTCACCGGC
GGTCTGGGCG CCCACTACGG CGGCCTTTCC GCAGGCTGCA CCACCATCCC GATGAGCGCC
GGCCAGACCG AGCGCCAGAT TCGCGTGCTG CGCACCATGG GCTCCAGCAT CCTGTGCTGC
ACGCCCTCCT ACGCCATGCA CATCGCCGAC ACGGCCATCG AGATGGGCAT CGACCCCGCC
AAGGAATTCA ACCTGCGCGT CGGCATCCAC GGCGCCGAGC CCTTCAGCGA CAATTTCCGC
GCCGAGCTGG AGCGCAAGCT CAACTACAAG GTGCTCGACG TCTACGGCCT GACCGAGACC
ATGGGTCCCG GCGTCGCCAT CGAATGCATG GAGCAGGAAG GCCTGCATCT GGCCGAGGAC
CACTTCTACG CCGAGATCAT CGACCCGGTC ACCGGCGAGA ACCTGCCTGA CGGCGAATGG
GGCGAGCTGG TGCTCACCTC CATCGACCGC GAGGCCGTGC CCGTCGTGCG CTACCGCACC
CGCGACATCA CCCGCATCAT CCCCGGCGAA TGCAAGTGCG GACGCACCCA TCGCCGCATC
GACCGCCTGC ATGGCCGCAC CGACGACATG CTCATCATCC GCGGCGTGAA CGTGTTCCCG
AGCCAGATTG AAGACGTCAT GAAGACCTTC GACCAGGTCA GCAGCTGGTA CCAAATCGTG
CTCACCCGCG ACCAGGGCGC CCTGGACAAG GTCACCCTCA AGGTCGAGAT CAACCCCGGT
TTCGACTTCG ACGAGATTTC CGCCATCGAG CACCTGCAGA AGGACATCCA AAGCCAGCTC
AAGAAGGCAC TCGCCGTCGC CGTTAGCGTT AAAATAGTGG AGCCGAAGAG CATTCCGCGC
AGCGAAGGCA AAGCCAAACG CGTCATCGAC TTGAGAGAAG GGATCAGGTA A
 
Protein sequence
MGKQDAILRM PHEQIEEIQL AGIKETVVKC YENVPFYKKT FDEAGFDPYA IETLEDIQKA 
PFLTKQDLRD NYPYGLFAVP LKDVREIHMS SGTTGIATVG GYTEHDLEIW GECFARGIEY
ADGGENDVCH VCYGYGLFTG GLGAHYGGLS AGCTTIPMSA GQTERQIRVL RTMGSSILCC
TPSYAMHIAD TAIEMGIDPA KEFNLRVGIH GAEPFSDNFR AELERKLNYK VLDVYGLTET
MGPGVAIECM EQEGLHLAED HFYAEIIDPV TGENLPDGEW GELVLTSIDR EAVPVVRYRT
RDITRIIPGE CKCGRTHRRI DRLHGRTDDM LIIRGVNVFP SQIEDVMKTF DQVSSWYQIV
LTRDQGALDK VTLKVEINPG FDFDEISAIE HLQKDIQSQL KKALAVAVSV KIVEPKSIPR
SEGKAKRVID LREGIR