Gene Shel_06210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06210 
Symbol 
ID8394513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp725439 
End bp726716 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content63% 
IMG OID644985383 
Productdissimilatory sulfite reductase (desulfoviridin), alpha/beta subunit 
Protein accessionYP_003143029 
Protein GI257063357 
COG category[C] Energy production and conversion 
COG ID[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG TATCGGACTA CATGGATTTG CTCGAGCGCC TCGAGAGCCA AAGCCTTCTC 
ATCACGGCCG AACGATGCCT CATGGTCCGC AATCGCAATG CACGTTGCAA TCGTTGCGCC
GCCGCATGCG TATCGGGCTG CATCAACACC CATGACAACC GCATCGCCAT CGACGCCGAG
AAATGCATCG GATGCGGAAC CTGCGCCACA GTCTGCCCGA CCGAAGCCAT AGCCCCGCGT
AACCCTGACG ACCTCGAAAT CGCGAGAGCG GCAAAACAGG TGATGGACCG CACCGGAGGC
CGGGCCGTGT TCACCTGCGC CCCCATGGCC AACCGGGCGC GCCATGCCGT CGACCCCGAT
ACCATTGTGC AGGTAGCCTG CCTGGGCCGC CTGGACGAAA GCCTCCTGGT GCTTTTGGCC
GCGGCTGGCG CAACGTCCAT TCGCCTGGTC GAAGGCGAAT GCGAGCAATG CGAATACACG
GAAGGATCCC CTGTGGCGCA CCAGGTTGCA TTCAATGCAT CCGCCCTGCT CAAAGCATGG
GGCTACACCA TCCCTGTACG CATCGGCGGC ACCTTTCCCA AATCCTGCCG ACTGCAGACC
GACCGCACCT ACGACGCGCG GCGCCGCGAG GTGTTCTTAG GCGTGAAGGA TGCGCTGCAG
ACCTCTGCCG CCGAAACGGC CGATTTCTTC ATCGAGCGCA CGTTCAACCG GAACGTGGAG
AAACCCCAGT TCGAACACGT AGCCGAAGAC GGAACGCTGC CCCATTTCTA CCCGCGGCGC
CGCCAGCTCC TCCAGGATGC CCTGGCCGAG CTCGGAGACC CCGAACTCCC CGACGTGACC
ACCCGCCTTA TGGGCAGGAT AACCATCGAC CAGAACCTCT GCAACGGCTG CCAGATGTGC
GCGGTCTTCT GCCCAACTGC GGCCATCGCC AAACGCGTCG ACGAGAACCC GTCCGCCGCG
CCGGCCAAAC TCTACCGGGC CCCGTCCAAT CCCAACCGTA CCAGCCAGAC CGCCCAGGAC
AAACCCGCCT TCGCGAATCC TTTCGCCAAA AGGACCCAGC TGCTACATGC TCCCAGCCTG
TGCGTGCAAT GCGGGACTTG TGCGGCCATC TGCCCGAAGC ACGCCGTCAG ATTGGATGCG
ACCGTGCCCA CGGCCGAACT CGTCGACGGT TACACGGAAG TCACCGACAT GCAGAACATC
TACGATGAGA AGGGCGGACC GGACGCCATT CGGAACTCAA TGAAGAAGCT CATCGACAGC
CCCTACATAT GGTGCTGA
 
Protein sequence
MSSVSDYMDL LERLESQSLL ITAERCLMVR NRNARCNRCA AACVSGCINT HDNRIAIDAE 
KCIGCGTCAT VCPTEAIAPR NPDDLEIARA AKQVMDRTGG RAVFTCAPMA NRARHAVDPD
TIVQVACLGR LDESLLVLLA AAGATSIRLV EGECEQCEYT EGSPVAHQVA FNASALLKAW
GYTIPVRIGG TFPKSCRLQT DRTYDARRRE VFLGVKDALQ TSAAETADFF IERTFNRNVE
KPQFEHVAED GTLPHFYPRR RQLLQDALAE LGDPELPDVT TRLMGRITID QNLCNGCQMC
AVFCPTAAIA KRVDENPSAA PAKLYRAPSN PNRTSQTAQD KPAFANPFAK RTQLLHAPSL
CVQCGTCAAI CPKHAVRLDA TVPTAELVDG YTEVTDMQNI YDEKGGPDAI RNSMKKLIDS
PYIWC