Gene Shel_06190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06190 
Symbol 
ID8394511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp723661 
End bp724866 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content62% 
IMG OID644985381 
ProductNADH:ubiquinone oxidoreductase chain I-like protein 
Protein accessionYP_003143027 
Protein GI257063355 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.348561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGG TTGAAACGGA TAAGCACAGC GTGGCCGATG AGATGGCCGC GCTGTCTGCG 
CTTGCGAGTT TCGGCTTGAG CGTGTACCCC GAGCGGTGCG TCCGCGTGCG CAACCGCCAT
TCATCCTGCA GCAGGTGTGC CGATGCCTGC ACGTCCGGCG CCATTTCGCT GGAACACGGC
GAATGGAGCA TGAACCCCGA CCTCTGCGTC GGGTGCGGAA CCTGCGCGAC TGTATGTCCC
ACCTGCGCAT TGGAGGCGCA GCATCCAAAC GATACGATGC TGATGGCTTC TGCCATGAAA
AGCGCCCGGG CCTGCGAAGG CGAGGCGGTG TTCGTCTGCC ATAGGACCAT GGAACGCCAT
CCGGACATCG ATTCCGACAA GGTCTGCCAG GTTGTGTGCT TGAGCCGCCT GGAGGAGACG
TTGGTGGCTA CGTTGTTCGC CCAGGGCGTG AAGCGTGTGG CGGGCGTGCA TGCGGACTGC
GCGAACTGCC CGCGCCACCA GGGAATCAAG AGCGCGCACC TCGTGAAAGA CACGATGTCG
GCCATTTGTG AAACCTGGGG TATCGACGCC CGTCTCGTTT TGACAGACGA GTTGCCTTCT
GCGGCTTTGC GGGATGACGG GGCCTTTCCG GCATCGGATG ATCCGGACGG AATCGATTTG
AGCGCGTACG TGGCCGCGCC GGATCGCGAT CAGGCGATGG CAGAAGGATC GAGCGTTTCC
CAAGTGGATG GACGCATCAA GGCGAGCTAC GTGCCCGCCC ATGTCATGAA GGACGGCACG
CTTCCGCATT TCGTGCCGTC GCGTCGGCAG AGGCTGCTTG ACCAGCTGGC GACCTTCGGA
GAGCCGGTTG CCGACGAGCT CGATTGCCGA TTGTGGGGGC ATGTCGTCAT CGATTTCAAT
GCATGCAAGT CCTGCAAGAT GTGCGCTGTG TTCTGCCCGA CGGGGGCCAT CTGCAAGTAT
CGCGACGAAA ACGGCGTGGC GGGCATCGAG CACTATGTGG CCGAATGCGT GCATTGCGGG
CTCTGCCAGG ACATCTGCCC TGCGGGCGCC ATCAAGAGCG TGACCCAGGT TCCCGCCAAG
CAGCTTGCGC ATGGCGAAAC CGAGCGGTAC TGCATGCCCG ATCCCGAGTG GTGGACCGGC
CCCGACCAGA TCCTGCGCAG GATGCGGCCT CAGATTTCAG GCAATTCCGT ATCCCACAGT
TACTGA
 
Protein sequence
MKWVETDKHS VADEMAALSA LASFGLSVYP ERCVRVRNRH SSCSRCADAC TSGAISLEHG 
EWSMNPDLCV GCGTCATVCP TCALEAQHPN DTMLMASAMK SARACEGEAV FVCHRTMERH
PDIDSDKVCQ VVCLSRLEET LVATLFAQGV KRVAGVHADC ANCPRHQGIK SAHLVKDTMS
AICETWGIDA RLVLTDELPS AALRDDGAFP ASDDPDGIDL SAYVAAPDRD QAMAEGSSVS
QVDGRIKASY VPAHVMKDGT LPHFVPSRRQ RLLDQLATFG EPVADELDCR LWGHVVIDFN
ACKSCKMCAV FCPTGAICKY RDENGVAGIE HYVAECVHCG LCQDICPAGA IKSVTQVPAK
QLAHGETERY CMPDPEWWTG PDQILRRMRP QISGNSVSHS Y