Gene Shel_06130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06130 
Symbol 
ID8394505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp718606 
End bp719232 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content61% 
IMG OID644985375 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003143021 
Protein GI257063349 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAT ATGCGGTCAT CACCGACCTC AACCGCTGCG TTTCCTGCCT CAACTGCTGC 
GTTGCCTGCA AGGAAGCAAA CGATGTGCCT ATCGGCAACT TCTGGATCAA GATCCTGCGC
GTCGGGCCGA ATCCCAAGAC CGAGGATTCC GTCTATCCCG ATGTGGAGAT GTACTACCTG
CCCATCAGCT GCCAGCACTG CAAGAATCCG GCATGCGTCG ACGTGTGCCC CACGGGCGCC
TCGCACCGTA CGGAGAACGG AACCGTGCAG ATCGACCACG ACAAGTGCAT CGGCTGCCAG
TTCTGCGTCA TGGCCTGCCC TTACGGCGTC CGCTACCTCA ACGAGGAAGA GGGCGTGGTG
GAGAAGTGCA CCCGCTGCTA CCAGAAGACC AACGAAGGCG AGCTGCCTTC TTGCGTCACG
TCCTGCGGCG GCCGTGCCCG TTGGTTCGGC GACATGGACC TGGGCTACGA GGACTTCAGG
GGCTCCCTGG GTGCCGACGG CCAGCCTCTG CGCTTTACCG ACACCGATTA TGTCAAGCCG
TTTGAGGAGA GCGACGTCTA CTCGTTGCCG GATTCCGGCA ACGGGCCTTC CGACCGCTTC
ATCCTCCGCA ACAGGACTTG GAGGTAG
 
Protein sequence
MTQYAVITDL NRCVSCLNCC VACKEANDVP IGNFWIKILR VGPNPKTEDS VYPDVEMYYL 
PISCQHCKNP ACVDVCPTGA SHRTENGTVQ IDHDKCIGCQ FCVMACPYGV RYLNEEEGVV
EKCTRCYQKT NEGELPSCVT SCGGRARWFG DMDLGYEDFR GSLGADGQPL RFTDTDYVKP
FEESDVYSLP DSGNGPSDRF ILRNRTWR