| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_06030 |
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| Symbol | |
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| ID | 8394495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 702282 |
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| End bp | 705185 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985365 |
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| Product | YhgE/Pip-like protein |
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| Protein accession | YP_003143011 |
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| Protein GI | 257063339 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1511] Predicted membrane protein |
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| TIGRFAM ID | [TIGR03061] YhgE/Pip N-terminal domain
[TIGR03062] YhgE/Pip C-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.646381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.719714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAAAG TACTTGAAAT ACTCGGGCGA GATCTTGGCC GCCTTATCCG CAACCCTCTT
GCAACAGTGG TCGTACTTGC CATGTGCATC CTGCCGTCGC TGTACACCTG GTACTGCGAC
GTCGCTTTTT GGGACCCCTA CGGCAACACC GGCAACATCC CGGTTGCGGT GGCGTCCGCC
GACGAAGGCT ACGATCTGGC GAATCTGGCC GACGAGCTGC CGGTCGACGC GTCCGAAGGG
CTCGGCGCAT CGTCTGAGGC CCGCGAGGAG AACTACGTCA ACATCGGCGA GCAGCTCGAG
GACCAGCTTC GCGAAAACAA CCAGCTCAAG TGGATATTCG TGAACGAAGA CGAAGCCATC
CAAGGCGTGA AGGCCGGCGA CTACTACGCG GCCATCGTCA TTCCCGAAGA CTTCACCAAC
CAGTTGATCC AGGTCATCCT TCAGAACAGC GACGACATGC CGAAGATCCA ATACTACGTG
AACGAGAAGA GCAACGCCGT GGCGCCGAAG ATCACCGACG CCGGCTCACG CACCATCCAG
CAGCAGATCA ACGCGTCCTT CGTCGAGCTG CTCACCCAAA CCATCCTGGA AACGCTGCAG
TCCGCTGGCT TTGACCTGGA CGCATCCGCT ACCGATGCCG AACAGACCCT GACCCGAAAG
CTTTCGGGGG TCCAAGGCTC CCTCGACGAG GTGCAGGCTT CCCTTGACGG GTTGGGCGAA
TCCGTCAGCA AGGCGCGCAC CGCCACGGCA GACGCGCGGC TCACGTTAAC CGACCTGCAG
GCATCGCTAC CCACCATCGT ATCCGGCGTG AACCAGGCCG ACGACCTTTT GGGAGACATC
CGCACCCAAG GCGGGGCCTA TGCCACAGAA GCTTCTGCAG CCCTGGGCGA AGGCGCCTCG
AAGCTCGGCG GGGCCTCGGC GCAGGCGTCG AGCACCGTGG GGGCCGCAAG CGCCGACGTG
CTGACCCTCA AGGCGAAGGT CGATGCCGCC ATCGAAGCCA TGCAGGACGT GATCGACCGC
AACACCGAAA CCATCGCCGA GCTGCAGGAC ATCGTGGACG CGGCCTCTGC CCGCCTGGCG
GAAGCCACGG GCGACGACAC GGTCCTCGAT CCCGAATCCC CGCTGTCGGG CATCACCGAC
GAAACGGGGC AAATCGCCCA GGACGCCATC GACGACGCCC AGGCGATCAT CGACCAGCTC
ACGGCCGAAA ACGCGAAATA CCAGGACGTG GTCGACCGCC TGACCCGCGC TAGCGACAAC
CTGGGCGCCG TGGCCACGTC CACCGACGCC TCCGTGGAGC AGATCGACGC CGCCGTGCAG
AACGCCATAG CGGTGTTGGG CGGCGCCCAG ACCACCTTCA ACACCGACCT GCTGCCCCAG
CTGTCAAGCG GCCTGGACTC GCTGTCCAGC GCCGGTTCCA ACATGACCGC CGCCGCGGCG
GGCGCCGACA CCACCATCGA CCAGGCCGTG GCCTCCCTCG ACGCCCTGGA CGGCATCCTG
GACCAGACCG AAACCTCGCT TTCCACCTGG CAGGACGACA TCCAGCGCAT CCAGGACCGC
CTGGACGGCA TCGCCACCGA CATCCGGTCC CTATACAACG CCAACTCGCT GGAGACCCTG
GCCGGGCTTC TGGGTATGGA CGTGCAGGAG ATTGCATCGT TCATCGCGTC GCCCGTGACC
CTGACCACCG AGAAGGTGTA CCCCGTCGAA TCCTACGGCT CCAGTGTGAA CCCCTTCTTC
ACCAACCTGT CGCTGTGGAT CGGCGGCTTG GTGCTGATCG CCATCCTGAA GGTTGAGGTT
GACCGCACGG GCCTGGGCGA CGTCAAGCCC TACCAGGCGT ATCTGGGACG CTGGCTCTTC
TTCGTGCTGA TCGGCATCGT CCAATCCGTC GTGCTGTGCA CAGGCGAGCT GCTCATCGGC
GTGCAATGCA ACCACGTTCC GGCCATGTAT CTGGCTGCCA TGGTGGCGTC CGTCGTCTAT
GTGAGCATCT CCTACTCGCT CACCATCACG TTCAAGCACA TCGGCAAAGC CATCGCGGTC
ATGCTGCTTA TCGCGCAAAT CCCCGGCGGT TCGGGCATGT ACCCCGTCGA AATGCTGCCG
GACTTCTACC AACGGCTGCA CCCGCTGGTG CCCTTCACCT ACGGAATCAA CGCAATACGC
GAGGCCATGT TCGGCTTCTA CGGGAATTAC TACGTCCACA ACCTGCTCGT CCTGGCGCTG
TTCTTCATCC CCACCCTCAT CGTGGGCATC GCGCTGCGAC CCTACCTCAT GAACATCAAC
CTGCTGTTCG ACCGCGAGCT GAAGAGCACC GGCGTCATGA TTCACGAGGA GCACACCATC
GGTATCGAGC GCTTCCGCAT GCGCACCATC ATCCGCGCGC TCATGAACGC CGACGAATAC
CGCTCGCAGC TGACCGTCCG AGCCGCGCAG TTCGACGCGT ACTACCCGAT CATGCGCAGG
CTGGGACTGA TCTTCATGAT CTCGCTCCCG CTCATCCCGC TGACGGTCAT GGCCGTGGTC
GACCTGGGCA TCGACGGGCG CATCGCGGCT CTGGTCCTGT GGATCCTGCT GGTCATCTTC
ACGGTGGCCA TGCTCATCAT GCTCGAATAC GCGAAAACGA ACATCTCCAA CCAGATGAAG
CTCAACGGCA TGAGCCAAGA CGAGCTGGCT GCCTCCTTGG CGATGCATGC CAACATGACC
CGCACCGGGC ACGCGTTGAA GCTGTCGAAG CTGCTGACCC GAATGGCCGG CATCCAAACC
GACCAGAGCG AAGCCACAGG GCCGGTGCGG AACGCCGCGA CCGAAGCCGT ACTGGCGGAT
GCGGCCGCAT CCGAGGCTGA GCCCGAACCT GCGGCCGAGC CCGAGCCCGT GACCAACGAG
GACAAGGACG GCAGCCATGC ATAA
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| Protein sequence | MGKVLEILGR DLGRLIRNPL ATVVVLAMCI LPSLYTWYCD VAFWDPYGNT GNIPVAVASA
DEGYDLANLA DELPVDASEG LGASSEAREE NYVNIGEQLE DQLRENNQLK WIFVNEDEAI
QGVKAGDYYA AIVIPEDFTN QLIQVILQNS DDMPKIQYYV NEKSNAVAPK ITDAGSRTIQ
QQINASFVEL LTQTILETLQ SAGFDLDASA TDAEQTLTRK LSGVQGSLDE VQASLDGLGE
SVSKARTATA DARLTLTDLQ ASLPTIVSGV NQADDLLGDI RTQGGAYATE ASAALGEGAS
KLGGASAQAS STVGAASADV LTLKAKVDAA IEAMQDVIDR NTETIAELQD IVDAASARLA
EATGDDTVLD PESPLSGITD ETGQIAQDAI DDAQAIIDQL TAENAKYQDV VDRLTRASDN
LGAVATSTDA SVEQIDAAVQ NAIAVLGGAQ TTFNTDLLPQ LSSGLDSLSS AGSNMTAAAA
GADTTIDQAV ASLDALDGIL DQTETSLSTW QDDIQRIQDR LDGIATDIRS LYNANSLETL
AGLLGMDVQE IASFIASPVT LTTEKVYPVE SYGSSVNPFF TNLSLWIGGL VLIAILKVEV
DRTGLGDVKP YQAYLGRWLF FVLIGIVQSV VLCTGELLIG VQCNHVPAMY LAAMVASVVY
VSISYSLTIT FKHIGKAIAV MLLIAQIPGG SGMYPVEMLP DFYQRLHPLV PFTYGINAIR
EAMFGFYGNY YVHNLLVLAL FFIPTLIVGI ALRPYLMNIN LLFDRELKST GVMIHEEHTI
GIERFRMRTI IRALMNADEY RSQLTVRAAQ FDAYYPIMRR LGLIFMISLP LIPLTVMAVV
DLGIDGRIAA LVLWILLVIF TVAMLIMLEY AKTNISNQMK LNGMSQDELA ASLAMHANMT
RTGHALKLSK LLTRMAGIQT DQSEATGPVR NAATEAVLAD AAASEAEPEP AAEPEPVTNE
DKDGSHA
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