Gene Shel_05970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05970 
Symbol 
ID8394489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp694724 
End bp695446 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID644985359 
Product4Fe-4S protein 
Protein accessionYP_003143005 
Protein GI257063333 
COG category[C] Energy production and conversion 
COG ID[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.526653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGAA AAATCATTCG TATAGATGAA GAGAAATGCA ACGGGTGCGG CCTGTGCGCG 
GAGGCGTGTC ACGAAGGCGC CATCGACATG GTGGACGGCA AGGCCAAGCT CGTGCGTGAG
AGTTTCTGCG ACGGATTCGG CGATTGCCTG CCGAACTGTC CGACCGGGGC CATCTCCTTC
GAGGAGCGTG AGGCCCCCGC ATATGACGAG GCCGCCGTAA AGGCGAGCCA GATGACGAAG
GAGAAGACGA CAATGGAAGC GCATGCCCAC AATCACCAGG GTGGATGCCC CGGCTCGCAG
ATGATGCAGT TCGATTCCGA AGGGAGGCTT ACCGGCGAGG TGCCTGCCGC GCGTCCGGTC
TCGAGGCTTC GGCAATGGCC CTGCCAGCTG AAGCTACTGC CGACACAGGC GCCGTTTTTC
GACGGTGCGA AGCTGCTGAT CGCCGCCGAC TGCACAGCGT TCGCGTACGC CAACATCCAC
GAGGAGTTCA TGAAGGGCAA GGTCACCGTA ATCGGCTGCC CGAAGCTGGA CATGGTGGAC
TACACCGAGA AGCTTACGTC GATCATCGCC GACAACGACA TCAAAGCCGT CACCATCCTG
CGCATGGACG TGCCTTGTTG CGGCGGACTG CAGCGTGCTG CCGAAAACGC CCTGCGTGCC
AGCGGGAAGT TCATCCCCTG GCAGGTGGTT GTCGTGAACC GCGACGGCAC TCTGGCTGAA
TAA
 
Protein sequence
MIRKIIRIDE EKCNGCGLCA EACHEGAIDM VDGKAKLVRE SFCDGFGDCL PNCPTGAISF 
EEREAPAYDE AAVKASQMTK EKTTMEAHAH NHQGGCPGSQ MMQFDSEGRL TGEVPAARPV
SRLRQWPCQL KLLPTQAPFF DGAKLLIAAD CTAFAYANIH EEFMKGKVTV IGCPKLDMVD
YTEKLTSIIA DNDIKAVTIL RMDVPCCGGL QRAAENALRA SGKFIPWQVV VVNRDGTLAE