Gene Shel_05950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05950 
Symbol 
ID8394487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp693303 
End bp693869 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID644985357 
Productpredicted transcriptional regulator 
Protein accessionYP_003143003 
Protein GI257063331 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.836167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG AGAGTGCCAT ATTGGCTATC ATCAAGATGT ATCCGGACAT TACAGGCTAT 
CAAATTAAAA CAAACATAGA TGCAATGGGT GGAAACGTCG TCAAGATCCA TTTGTCGAAA
ATCTATCCCT GCTTGAAGAA GATGACTGAG CAGGGTCTTC TTTCGTGCCG CAGCGTTCCG
CAGGAGGGCA GGCTCGACCA GAAGTTCTAC ACCCTGACGC CCGCAGGCGA AAAGGCGCTT
GACGAGTATT ACGAGAAGCC CTTCGAGTTC AAGGGCTCGC GCGCGTCCTT CGACGAGTAT
CTGCTCCAGC TGGCGAACAT GGCTTACATG CCCAACGAGC GTATCGTCAG CTACATTGAC
GAGGGCATCT CCTATATGGA GAACAGCTTG GCCGCCGACG AGGCGCGGCT GGACGACGAA
CCCGCCGAAG AGGCGCTTAC CGGCATGGAC GAGCAGTCAT GCCGCGCCTA TGCGGACTTG
TGGAAACGCG AGAACGAGCT GGTGGCGCGA GAGGCCCGCG GCCGAATCGA ATGGCTGAAG
GAGCTGCGCG AAGCCTATTC CGCTTAA
 
Protein sequence
MKTESAILAI IKMYPDITGY QIKTNIDAMG GNVVKIHLSK IYPCLKKMTE QGLLSCRSVP 
QEGRLDQKFY TLTPAGEKAL DEYYEKPFEF KGSRASFDEY LLQLANMAYM PNERIVSYID
EGISYMENSL AADEARLDDE PAEEALTGMD EQSCRAYADL WKRENELVAR EARGRIEWLK
ELREAYSA