Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05950 |
Symbol | |
ID | 8394487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 693303 |
End bp | 693869 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644985357 |
Product | predicted transcriptional regulator |
Protein accession | YP_003143003 |
Protein GI | 257063331 |
COG category | [K] Transcription |
COG ID | [COG1695] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.836167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG AGAGTGCCAT ATTGGCTATC ATCAAGATGT ATCCGGACAT TACAGGCTAT CAAATTAAAA CAAACATAGA TGCAATGGGT GGAAACGTCG TCAAGATCCA TTTGTCGAAA ATCTATCCCT GCTTGAAGAA GATGACTGAG CAGGGTCTTC TTTCGTGCCG CAGCGTTCCG CAGGAGGGCA GGCTCGACCA GAAGTTCTAC ACCCTGACGC CCGCAGGCGA AAAGGCGCTT GACGAGTATT ACGAGAAGCC CTTCGAGTTC AAGGGCTCGC GCGCGTCCTT CGACGAGTAT CTGCTCCAGC TGGCGAACAT GGCTTACATG CCCAACGAGC GTATCGTCAG CTACATTGAC GAGGGCATCT CCTATATGGA GAACAGCTTG GCCGCCGACG AGGCGCGGCT GGACGACGAA CCCGCCGAAG AGGCGCTTAC CGGCATGGAC GAGCAGTCAT GCCGCGCCTA TGCGGACTTG TGGAAACGCG AGAACGAGCT GGTGGCGCGA GAGGCCCGCG GCCGAATCGA ATGGCTGAAG GAGCTGCGCG AAGCCTATTC CGCTTAA
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Protein sequence | MKTESAILAI IKMYPDITGY QIKTNIDAMG GNVVKIHLSK IYPCLKKMTE QGLLSCRSVP QEGRLDQKFY TLTPAGEKAL DEYYEKPFEF KGSRASFDEY LLQLANMAYM PNERIVSYID EGISYMENSL AADEARLDDE PAEEALTGMD EQSCRAYADL WKRENELVAR EARGRIEWLK ELREAYSA
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