Gene Shel_05920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05920 
Symbol 
ID8394484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp690287 
End bp690658 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content62% 
IMG OID644985354 
Producttranscriptional regulator, ArsR family 
Protein accessionYP_003143000 
Protein GI257063328 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.560602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACGG AGAACGCAAC ACCTTCCGAG ATGCCGCAGC CCGAGGCGCC GCAGCCCGAA 
GCCTGCCCGG CGGGCCTTCC TTTCGTTCCC GATGAGGAAA TGCTCTACGA CCTGGCCGAC
CTGTTCAAGG TGTTCGCCGA CACGACGCGC ATCAAAATCC TGTACGCCCT GATGGAAAGC
GATCTGTGCG TCGCCGACAT CGCCGAGGCG GTGGGCGGGG TGTCGCAAAG CGCCGTCAGT
CACCAGCTGC GCATCCTCAA GCAGGCGCAC CTGGTCCGCT TCCGCCGCGA AGGTAAGCAG
GTCATCTACG CCCTGTCCGA CAACCACGTG TACACCATGT TGTCCCAGGG TCTTTCCCAT
ATTTGCGAAT AA
 
Protein sequence
MDTENATPSE MPQPEAPQPE ACPAGLPFVP DEEMLYDLAD LFKVFADTTR IKILYALMES 
DLCVADIAEA VGGVSQSAVS HQLRILKQAH LVRFRREGKQ VIYALSDNHV YTMLSQGLSH
ICE