| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05890 |
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| Symbol | |
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| ID | 8394481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 686490 |
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| End bp | 687908 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644985351 |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003142997 |
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| Protein GI | 257063325 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCAG GGACGTTCGA CATATCGGAG TTGCGCGAAG GCGCCATGCC GTCGCGACGC
GAGATGATGC GCCTGGTGGC AAGCCTGAGC ATGCCGGCGA TCATGGCCGA ACTGAGCGTC
ATCATCATGC AGTACATCGA CGCTGCCATG GTGGGCAGCC TGGGCGCGCA GGCCTCCGCA
TCCATCGGCC TGGTGGAAAC CACGCTGTGG CTCACCGAGG GGCTGTGCTT TTGCGCAGCC
ACGGGATTCA CCGTGCAGGT GGCGCAGCTT GTGGGCGCGG GCCGCGACGA CCGTGCCCGC
AACGTGACGC GCCAGGCCAT TCTGGTGCTG ACCGCGTTCA GCCTGGTAAT GCTGGGCATA
AGCGCCGCCA TATCGGGCAG CCTTCCCGCT TGGCTCGGCG GTCGGCCCGA GCTTCTGGAC
GATGCGTCGC GGTATTTCCT CATTTTCTCC TGCGCGCTGC CTGCCATGCA GATGATTCGC
CTGGGAACAG GTGTTCTGCA ATGCAGCGGC GACATGCGCA CGCCGAGTGC CCTCAACATC
CTGGGCTGCG TGCTGGATGT GGTGTTCAAC TGGTTCCTCA TCTTCCCGAC GCGGGACGTG
GACCTGTTCG GCGTGGCGTT TGCCATGCCG GGCGCGGGGC TGGGCGTGAC AGGCGCAGCT
GTGGGTACGG CGGCCTCGCA GGTTGTGGTC ATGGTGCTGA TGATCTACTT CGCGCTGATC
AGGAATCCTA AAATCAACCT GCGCATACCC GGCAGCTGGC GGTTGGAACG CCGCACGGTG
GCGACGGCGG GTAGGCTGTT TGCGCCCATG GCCCTGGAGC GCATCGTCGA GAACAGCGCC
TACATCGCCA CGACGGTTAT CGTGGCACCG CTCGGGACCA CCGCCATGGC CGCGCACACG
CTGGCGATCA CCGCCGAGAG CCTGTGCTAC ATGCCGGGTT ACGGCATCGG CGCGGCGGCC
ACCATGCTGG TGGGGCAGGC GCACGGTGCG GGGCGACGTG ACTTGACCCG CGGGTTCGCG
AATTTCGCGG TGCTGTTGGG CATGCTGCTC ATGGCGGCGG CGGGCGTGGT GCTGTTTGTG
GCGGCGCCGT ACATCATGGC ATGGCTTACC CCTGACCAGC AAGTTCGCGA GCTGGGCACG
CTGGTGCTGC GCATCGAGTC CTTCGCCGAG GCGTTCTACG GCGCGCAGAT CGTGGTCAGC
GGATCGCTGC GCGGCACGGG CGACATCCTG GGGCCCACCG TCATCAACCT GGCGTGCATG
TGGGGGTTGC GCATTGCCGC GTCGGTTCCG TTGGCGCTGG TCATGGGGCT GCCAGGCGTG
TGGATTGCCA TGGCTGCGGA GCTTGTGGTG TGCGGCGGCA TCCTGCTTGT CCGGCTGCGT
CGCGGCAAAT GGCTCGACCG CAAGGTACTG GCCGGATAG
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| Protein sequence | MAAGTFDISE LREGAMPSRR EMMRLVASLS MPAIMAELSV IIMQYIDAAM VGSLGAQASA
SIGLVETTLW LTEGLCFCAA TGFTVQVAQL VGAGRDDRAR NVTRQAILVL TAFSLVMLGI
SAAISGSLPA WLGGRPELLD DASRYFLIFS CALPAMQMIR LGTGVLQCSG DMRTPSALNI
LGCVLDVVFN WFLIFPTRDV DLFGVAFAMP GAGLGVTGAA VGTAASQVVV MVLMIYFALI
RNPKINLRIP GSWRLERRTV ATAGRLFAPM ALERIVENSA YIATTVIVAP LGTTAMAAHT
LAITAESLCY MPGYGIGAAA TMLVGQAHGA GRRDLTRGFA NFAVLLGMLL MAAAGVVLFV
AAPYIMAWLT PDQQVRELGT LVLRIESFAE AFYGAQIVVS GSLRGTGDIL GPTVINLACM
WGLRIAASVP LALVMGLPGV WIAMAAELVV CGGILLVRLR RGKWLDRKVL AG
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