Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05880 |
Symbol | |
ID | 8394480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 685905 |
End bp | 686405 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644985350 |
Product | nitroreductase |
Protein accession | YP_003142996 |
Protein GI | 257063324 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCTA TCTACAAACG CGCCAGCGTA CGCACCTACG CCGACAAGGA CGTGCCCGAC GAGCTGGTGG AACGCCTGCT ACGCGCCGCC ATGGCAGCAC CCTCGGCCGG AAATCAGCAG CCCTGGGAAT ACTTCGTGGT GCGCGACGCC GACATACGCC AGAAGCTGGC CGACGCCTCG CCCTACGCCA AGCCCTCGGG ACGGGCGCCC GTGGTGTTCG TGGCCTGCTG CCGGACAGAG GGCACGCGCT TTCCCGAATG CGACACCCAC GACATGGCAG CCTCGGTGGA AAACCTGCTG CTTGAAGCCG CCGACCTGGG GCTGGGCTGC GTTTGGATGG CTGTCGAACC TTTCGAGGAC CGCATGGCGG CCACGCTTGA GGCGCTGGGC AATCCCCAGG GGCTGCGTCC CTTCGCGCAA ATCGCCTGCG GGTGGCCCGA AGGCGAAGTG GCCGCCCACG GCGCCGAGCG TTACGACGAA TCCCGCGTCC ACTGGCTGTA A
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Protein sequence | MEAIYKRASV RTYADKDVPD ELVERLLRAA MAAPSAGNQQ PWEYFVVRDA DIRQKLADAS PYAKPSGRAP VVFVACCRTE GTRFPECDTH DMAASVENLL LEAADLGLGC VWMAVEPFED RMAATLEALG NPQGLRPFAQ IACGWPEGEV AAHGAERYDE SRVHWL
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