Gene Shel_05870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05870 
Symbol 
ID8394479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp685175 
End bp685690 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content59% 
IMG OID644985349 
Producthypothetical protein 
Protein accessionYP_003142995 
Protein GI257063323 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.786526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAA GGACAATCTA TGATGCTGTC ACAAGGTCGA GAGCCGCGGA GCTCTACGAC 
GAGGGATACG GAGTCCGAAC CATCGCAGAT TTAATCGAAG TTCCCTACGA AGCCGTGAGA
CAATGGATTG ACACCTACAG ATCCGTTGGC ATCGAAGGGC TGATGGTTAT GGGGCACAAG
TACACCAAGT ATTCGTTTGA GACCAAAGTA GCTGCGGCAC GAGCTGTCGT CGACGATGGC
GTGTCGAAGG CGGAAGCTAT GGCAAAGTTC GGGATCGCCT CGATGACTCC GCTGAAGAAC
TGGATGAGAG CATACCGGGA AGGCGGCCCC GAGGCGCTCA GGCCCAAGCC GAAGGGAAGG
CCCAGGGGGT CCGGCTCGCC GCCCAGGAAG CTGACGCGCG AGCAGGAGCT GGAACGCCGG
ATACAGAAGC TCGAGGCGGA GAACGCCTAC CTAAAAAAAT CGATAGCCCT GAAGGCGGAG
AAGCGCTCTC GAACCGCGAG AAGGCCGCGG CCGTGA
 
Protein sequence
MTRRTIYDAV TRSRAAELYD EGYGVRTIAD LIEVPYEAVR QWIDTYRSVG IEGLMVMGHK 
YTKYSFETKV AAARAVVDDG VSKAEAMAKF GIASMTPLKN WMRAYREGGP EALRPKPKGR
PRGSGSPPRK LTREQELERR IQKLEAENAY LKKSIALKAE KRSRTARRPR P