| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05840 |
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| Symbol | |
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| ID | 8394476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 679762 |
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| End bp | 681858 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985346 |
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| Product | DNA/RNA helicase, superfamily I |
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| Protein accession | YP_003142992 |
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| Protein GI | 257063320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0355773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCTA TTTTCGAAGA AGAGCAGCAG CATCTGACCG AAACCTACGG GCAGCTGGTC
GGCATACGCG ACGAGATGCT CGCCAAAATG GAGGCCAACA GCCGTGACGC CGCCAAAACC
ATCGGCGACA TGCGCGATGA GCTGGCCCTC GACTTCGCCA GCGACGACAT GACCATGGAA
ACGCTGGCCG ACTACGAGTC CATGAACCGC ATCATCGACA GCTATAACTT CTCGTCCACC
ATCAACGCCG AGCGCCTGCG TCGCGCCGTG CAGTTGCTCG AGCAACCCTA CTTCGCGAAG
GTCAGCCTGC AGTTCAGGCC GGGCGAGCCG GTCAAGGACA TCTATCTGGG TGTGGCCGGC
ATGACAAACG ACGAGCGACG CCACTTTATC GTGGACTGGC GCAGCCCCGT GGCCGAGGTC
TATTACAACC AGGAGAACGG TCGCACGTCG TACAAGGCCA ACGGGCGCAC CATCCAGGTT
GACCTGCTGT GCCGCCGCCA GTTCGACATC AATCGCGACA AATTGAACGC GTACTTCGAC
ACCACTGTGG CCATCGAGGA CCCGCTGCTG ATGTCGGCCT TGTCCAAACA ACGCTCCGAC
AAGATGCAGG CCATCACCAC TACCATCCAG AAGGAGCAGA ACCAGGTCAT CCGGCATGAC
GACGTGCCCG CGCTGCTGGT GGGCGGCATC GCCGGCAGCG GCAAGACCTC GGTGCTGCTG
CAGCGCATCG CCTATCTGTT CTACCAGGAG CGGGAGAACC TGAACCCCGA CGACGTGTTT
CTGATCACCC CCAACCCGGT GTTCCAGAAG TATATCGACA ACGTGCTGCC CGATATGGGC
GAACGCAACC CGCAGACCCG CACCTACGCC CAGCTCATGG ATTTCCTGGG CGTGCAGGCC
AGCGGCCAGG ATGCGCACGC CACCGCCGAG TCGCTTAAGG CGATCGACGC CGCGGTGGTC
AACCTGAAGC TGGACCAGGA AGACTTCCGG GACATCCGCC TGGGCGACCA GAGTGTCATC
TCGGCCAACC AGATCCGCAG CGCCATCAAC AAGCACAAGC GCATTCCCGC AGGTCCGCGC
CTGTTCGCGC TGGTGTGCGA AGACCTGAAC GAGCGGCTGG AGAACCGCCT GGCAAGCCTG
TGCACCAGCG AAGCCGTACA CGGCGAGATG CTCAACCTGA GTGTGGAGGA GCAGTCGCAG
ATCTTCGGCA TGCAGATCCA TCCGCAGGAC GAAGACGACT TCCGCGAGTA CGCGCAAACG
TATCTGCAGG TCAAATACGC GCCGGCCTTC GACGCCATCG AGAACGCCGA ATGGCTGCGC
CTAAACCGCA TCGGCATGCG GCTTTTGGGC ACGCAGGACC TTTCCCCCAT CGAGTGGCTG
CACCTGAAGA TGGCCGTCAC GGGACTGTCG AACCGCCACG CCCGTTTCGT CATGGTGGAC
GAGGTGCAGG ACTATACGGC GGCCCAGCTC ATGGTGCTGG CGCGCTACTT CAAAAACGCG
CACTTCCTGT TGCTGGGCGA CGAGAACCAG GCCATCAGGC CCGGCACGGC CTCCTTCGAC
GAGGTGCGCG AAGTGTTCCG GCTGACCCGT GGGCAGGTAG ACGAGTGTCG GCTCATGACC
AGCTACCGCT CGACGCCCGA GATCACGGAG CTGTTCTGCA GTCTGATGGA TTCGCAAGAA
CAGGTGCAGG TGCGCTCGGT GCAGCGCGAA GGCACCCCGC CCCGCCTGGT CGAATGCGCC
GAGGAGGCCG AATACGTCGC GGAGCTCAAG GGCATCGTGG CAAACGCGCC CAGCGAGGGC
CTGACTGCGA TCATCGTGTC GGGGCATCGC CAGGAGAAGC GCCTGGAACA GCTGCTCGGC
GACGAATGCC CCCAGGTCAT GCGGCACGAG GCGCAACTTC CCGAACATGG CGTCATTCTG
CTGGACCTGC CGCTGGCAAA GGGACTGGAG TTCGATCGCG TGGTGGTGGC CGACGCATCG
GCGGCCATCT ATCCGGAAAA CCAGCTGTCG CGCCGGCGCC TGTACACGGC CATCTCGCGT
GCGACCAAGC AGGTCACCGT CATGAGCCTG GGTCCCATGA CCCCGCTTTT GAAATAA
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| Protein sequence | MDPIFEEEQQ HLTETYGQLV GIRDEMLAKM EANSRDAAKT IGDMRDELAL DFASDDMTME
TLADYESMNR IIDSYNFSST INAERLRRAV QLLEQPYFAK VSLQFRPGEP VKDIYLGVAG
MTNDERRHFI VDWRSPVAEV YYNQENGRTS YKANGRTIQV DLLCRRQFDI NRDKLNAYFD
TTVAIEDPLL MSALSKQRSD KMQAITTTIQ KEQNQVIRHD DVPALLVGGI AGSGKTSVLL
QRIAYLFYQE RENLNPDDVF LITPNPVFQK YIDNVLPDMG ERNPQTRTYA QLMDFLGVQA
SGQDAHATAE SLKAIDAAVV NLKLDQEDFR DIRLGDQSVI SANQIRSAIN KHKRIPAGPR
LFALVCEDLN ERLENRLASL CTSEAVHGEM LNLSVEEQSQ IFGMQIHPQD EDDFREYAQT
YLQVKYAPAF DAIENAEWLR LNRIGMRLLG TQDLSPIEWL HLKMAVTGLS NRHARFVMVD
EVQDYTAAQL MVLARYFKNA HFLLLGDENQ AIRPGTASFD EVREVFRLTR GQVDECRLMT
SYRSTPEITE LFCSLMDSQE QVQVRSVQRE GTPPRLVECA EEAEYVAELK GIVANAPSEG
LTAIIVSGHR QEKRLEQLLG DECPQVMRHE AQLPEHGVIL LDLPLAKGLE FDRVVVADAS
AAIYPENQLS RRRLYTAISR ATKQVTVMSL GPMTPLLK
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