Gene Shel_05700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05700 
Symbol 
ID8394462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp663335 
End bp664078 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content61% 
IMG OID644985332 
Producthypothetical protein 
Protein accessionYP_003142978 
Protein GI257063306 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.746787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA GTGAAATGTG CAAGAGCGCG ACGGTGCACA TGGCCGCTGC GGCTGTGGCA 
GTCGCGATGG CGGTTATCTT CATGTGCGGC TTACACGGAG CTGCGTATGC TGCAGAGGCG
GATGCGGGTG GCGCCGCTTA TCGAGGTGAG GCAACGTCGT TGACGCTGGA GATGGTCTAC
GAGGACAACG GAACGTCCAA GGTCATTCCG GGTGTCACGT CCCAGGCGTA CCTGGTTGCC
ACCCTTGATC AGGCGTCGAA CACCTACACG CTGCTGCCCG AATACGCAGC TGTGGGGGCC
GATTTCAACA CGGAGATGAG CGCATCCAAG ATGATGGAAT ATGCAGCTCA GATGGCCGAA
ATCGCACAGT CTTCCGGTGC GAAGGGCATC TCTGCGACCT CCGATGCCAA GGGCATAGCG
GCATTCGGCA ATGTCGAGCC CGGCGTGTAC CTGGTGGTTC AGACGGGTCG CACGGGCGAA
GCGACCGGCT ACAAGAGCTA CGACCCGTTC CTGATCAACG TGCCGCAGTT CGAAGACGGC
AAGGCAACCT GCGACGTTGT GGCGTACCCG AAGCCCACGC CCGAGAAAGC GCCTGTTCCC
GACGAGCCGA AGAAACCTAC GCCGCATAAG GCTCCGCAGA CGGGTGACGA CGTGAACCTG
TGGCTTTGGG GCGGCTGCGC CATTGCAGGT GCCGTGATAA TCGTGATCGC CCTGATTGCC
CGTCGCCGCA TCAACAGGGG ATAG
 
Protein sequence
MLKSEMCKSA TVHMAAAAVA VAMAVIFMCG LHGAAYAAEA DAGGAAYRGE ATSLTLEMVY 
EDNGTSKVIP GVTSQAYLVA TLDQASNTYT LLPEYAAVGA DFNTEMSASK MMEYAAQMAE
IAQSSGAKGI SATSDAKGIA AFGNVEPGVY LVVQTGRTGE ATGYKSYDPF LINVPQFEDG
KATCDVVAYP KPTPEKAPVP DEPKKPTPHK APQTGDDVNL WLWGGCAIAG AVIIVIALIA
RRRINRG