Gene Shel_05610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05610 
Symbol 
ID8394453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp651663 
End bp652289 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content61% 
IMG OID644985323 
ProductFe-S-cluster-containing hydrogenase subunit 
Protein accessionYP_003142969 
Protein GI257063297 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATT GTCTCGTTAT CGATCTCGAG CGCTGCACCG GTTGCGACAC CTGCGTAGCA 
GCGTGCAAGC ATTGGCACAA CATCGACCTT GGCGTGTATC GCAACCGCGT TTCCGCCATC
GGCCCGATGG GAACCTATCC TAACGTAAGC ATGTACTGGC TGCCCATGCA GTGCCAGCAG
TGCGAGAATC CCGGCTGCAT CGCCGTCTGC CCGACGGGCG CCAGCTATCG CGACGAGGAA
ACCGGCGTTG TTCTGATCAA CGAAGAAGAA TGCATCGGTT GCCAGAGCTG CATGACCGGC
TGCCCCTACG GCGTGCGTTG GTACAACGCC AACACCAACA AGGTCGACAA GTGCACCCTG
TGCTTCGAAG ACCACATCGC CGAGCCGGAT GCTCCTTGGG AACCCGCATG CGTGCATAAC
TGCTGCACCG GCGCCCGTAT CTTCGGCGAC CTGGACGACC CCGAGAGCCC CGCAGCCAAG
GCTGTCGCCG CTGCCGGCGA GGAGAACTGC CACAAGCTTG ACGACATCGA CGGTGTCGGC
CCCTCGAGCG TGTACATTCT GAGCCGTACG GCCGAATGGC AGCCCTGGAG CGATCCTTCC
ATCGAAGTCA GGCGTTACGA GAAGTAG
 
Protein sequence
MKNCLVIDLE RCTGCDTCVA ACKHWHNIDL GVYRNRVSAI GPMGTYPNVS MYWLPMQCQQ 
CENPGCIAVC PTGASYRDEE TGVVLINEEE CIGCQSCMTG CPYGVRWYNA NTNKVDKCTL
CFEDHIAEPD APWEPACVHN CCTGARIFGD LDDPESPAAK AVAAAGEENC HKLDDIDGVG
PSSVYILSRT AEWQPWSDPS IEVRRYEK