Gene Shel_05570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05570 
Symbol 
ID8394449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp644372 
End bp645535 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content65% 
IMG OID644985319 
Producthypothetical protein 
Protein accessionYP_003142965 
Protein GI257063293 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTT TTGTCGCAAC ATCCACCGCC GCAACTGCCG CTGAAGCCGG CAAAGATGTA 
GCCGCGAAGA TTGCGGCCGG CATCGAGGGC GCCAAGGTGG CCATGGCTTA CGGCAGCTGC
GCATACGACT CGGCAGAGCT TCTGGCTGCC GTGGCGGCAG AGCTGCCTGG CGTGCCTGTG
GTGGGCAACA CGTCGTTTAC CGGCATTATC ACTCCCGAAG GATACGTGGG CGGCGACACC
CCGTTCTTCG GCATCTTGGC TCTGGGCGGC GATGACCTGG TCGTCGGCAC GGCCGGCGCT
CCCCGCGGCG AGCAGTGTCC CCGTAAGACC GGCGCCGAGC TGGCAAAGGC CGCTATGGCC
GCAGCCGGCA AGGACTGCGC ACCGGCCTAC TGGTATATGG TCGCCTCTCC CGCCGAGGAG
GAGTACTACA TCAAAGGCGT GACCGACGTC ATCGGCCGCG TTCCCTTCTT CGGCGGCTCC
GCTGCGGACA ATTCCATCGC CGGCGAGTGG TGGATGTACA ACGGCACCGA AACGTTCCAG
GACGGCTGCG TCGTCGCGTT CTTCTACACC GACGCCCCGT TCGCCAACAA GTTCACCGGC
GCCTATGCCG AAACCGACGA CTTCGGCGTG GTCACCAAGA TGAACGGCGA CCGCGGCATC
GCCGAGATCG ACGGCAAGCC GGCTCTGGAA GTTTACGCAG GTTGGCGCGG CATGCCGGTC
GACCAGCTCA TGGGCGGCGA CCTGCTGGTT GCTTCCATCG TGAGCCCGCT GGGCTTCAAG
GATCGTCTGG GCGACCTGAC GCTGATCCGC CATCCTATGG GCGGCAACGA GGACATGTCC
ATCGCCGTGG GCGGCAAGGT CGTCGAAAAG ACCTGCGTCG TTCGCATGGA AGGCGACGTG
GATTGCCTGG TCAACTCCGT GGCCAAGACA GTGGGCGAGC TGAATGAGAA GGCCGGCGCC
AAGCCTGCAG CCTACTTCTT CGTGCATTGC GGAGGACGTC GTGCCGCCAT CGGCGACCGC
ATCGACGAGG TGGCGGATGC ATTCGTGAAG GCTGCGGACG GTGTTCCGTT CCTGGTCGAG
TTCACTTTCG GCGAGTACGG CTTCGAGGAC GACGGCCTCA ACGCTGTGGG CGGCCTCATG
CTGTCCTTCA CCGCGCTCGG CTAA
 
Protein sequence
MKGFVATSTA ATAAEAGKDV AAKIAAGIEG AKVAMAYGSC AYDSAELLAA VAAELPGVPV 
VGNTSFTGII TPEGYVGGDT PFFGILALGG DDLVVGTAGA PRGEQCPRKT GAELAKAAMA
AAGKDCAPAY WYMVASPAEE EYYIKGVTDV IGRVPFFGGS AADNSIAGEW WMYNGTETFQ
DGCVVAFFYT DAPFANKFTG AYAETDDFGV VTKMNGDRGI AEIDGKPALE VYAGWRGMPV
DQLMGGDLLV ASIVSPLGFK DRLGDLTLIR HPMGGNEDMS IAVGGKVVEK TCVVRMEGDV
DCLVNSVAKT VGELNEKAGA KPAAYFFVHC GGRRAAIGDR IDEVADAFVK AADGVPFLVE
FTFGEYGFED DGLNAVGGLM LSFTALG