Gene Shel_05520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05520 
Symbol 
ID8394444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp638883 
End bp639425 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID644985314 
Productpredicted phosphoesterase or phosphohydrolase 
Protein accessionYP_003142960 
Protein GI257063288 
COG category[R] General function prediction only 
COG ID[COG4186] Predicted phosphoesterase or phosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTATT TCACCAGCGA CCTTCACTTC GGCAGCGTCG ATGTGGCCCA GCTGTCGAAC 
AGGCCCTTCG ACAGCATCCT GGACATGAAC GAATGCATCA TCCGCAATTG GAACGAGCGC
GTGAAGCCCG ATGACAAGGT CTATATCATC GGCGACTTCA TGAACCGCGC CGAAACCAAT
CCCGAGCATT ACCTCTCGCA GCTGCCCGGC CGCAAGCACC TCATCATCGG CAACCACGAC
CACGGTTGGA CGCAGCGCAT CGACGTGGAC GAATGGTTCG AAGCTGTCGA GTACATGACG
GAGATTCTGA GCGGGGGACA CCTGATCACG CTCTGCCACT ACCCGCTTAT GGAATGGCAC
GGCGGCCGCC ACGGTGCGTT CCTCATCCAC GGGCACCTGC ACGACCGTCG CGACGCGCCG
TTCTGGCCGC TGCTCCAGCG CTACAAAACC GCCTTGAACG CAGGTGTGGA CATCAACGGG
TTTGCGCCGG TCACCTTCGG CGAGCTTGTG GAGAACAACC GCCGCTGGAA GCAGATGGAC
TAG
 
Protein sequence
MDYFTSDLHF GSVDVAQLSN RPFDSILDMN ECIIRNWNER VKPDDKVYII GDFMNRAETN 
PEHYLSQLPG RKHLIIGNHD HGWTQRIDVD EWFEAVEYMT EILSGGHLIT LCHYPLMEWH
GGRHGAFLIH GHLHDRRDAP FWPLLQRYKT ALNAGVDING FAPVTFGELV ENNRRWKQMD